DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and asp-12

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_505134.1 Gene:asp-12 / 179210 WormBaseID:WBGene00017678 Length:395 Species:Caenorhabditis elegans


Alignment Length:399 Identity:106/399 - (26%)
Similarity:185/399 - (46%) Gaps:51/399 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLAFLSLV-FATQKILKVPLYVRRSFNESEVFLARSATEGGETLQLQLLLQTHN----------- 60
            ||||:::: ..:..:::..|..|    ||.........|.|..:|.:..|:..|           
 Worm     5 LLAFVAILGMCSATVVQHKLIYR----ESPKMQMMRRGEWGAYVQHKAALRDANPAVFASAPQNV 65

  Fly    61 ----NMEYYGTIAMGNPRQNFTVIFDTGSSNTWLPSVNCPMSNSACQNHRKYNSSRSSSYIPDGR 121
                ::||.|.|.:|.|.|.|.|:.||||:|.|:|..||   :..|:...:::||:|:::..:|:
 Worm    66 NDFGDVEYLGNITIGTPPQQFIVVLDTGSANLWVPGSNC---DGTCKGKSEFDSSKSTTFKKNGQ 127

  Fly   122 NFTLRYGSGMVVGYLSKDTMHIAGAE-----LPHFTFGESLFLQHFA--FSSVKFDGLVGLGLGV 179
            ::.::|.||...|.:..||:...||.     :|..|||   ...|.:  |.:...:|::||....
 Worm   128 SWQIQYESGSAKGIMGVDTVAFGGASEQQLLVPSTTFG---IASHISSNFKNDAAEGILGLAFTS 189

  Fly   180 LSWSNTTPFLELLCAQRLLEKCVFSVYLRRDPRE-------IVFGGFDESKFEGKLHYVPVSQWH 237
            |:....||.|.....:::|::.:|:|:|......       ..:|..|.:.....:.|.|:|...
 Worm   190 LAVDGVTPPLINAINKKILDQPLFTVFLEHKGTAKNVGGGVFTYGAVDTTNCGPVIAYQPLSSAT 254

  Fly   238 TWSLQISKSSVGTKQIGGKSNAILDTGTSLVLVPQQTYHNLLNTLSAKL---QNGYFVVACKSGS 299
            .:........:|:.....||..|.|||:||:..|....:.....|.||.   .:.|: :.| |.|
 Worm   255 YYQFVADGFKLGSYSNNKKSQVISDTGSSLIGGPSAVINGFAQALGAKYHSDDDAYY-LPC-STS 317

  Fly   300 LPNINILIGDKVFPLTSSDYIMEVLLDRKPACVLAIAPINRG----FWVLGDIFLRRYYTVFDAT 360
            ...::|.||..|:.:...:||::|.:.  ..||.|....:.|    .|:.||.|:|:|..::|..
 Worm   318 KGTLDITIGGNVYSIEPVNYILDVGMG--DTCVFAAFSFDFGGFGPSWIFGDPFIRQYCNIYDIG 380

  Fly   361 EKRIGLAKA 369
            ::|||.||:
 Worm   381 QQRIGFAKS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 91/327 (28%)
Asp 63..369 CDD:278455 92/326 (28%)
asp-12NP_505134.1 Asp 72..388 CDD:365818 91/325 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162019
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.840

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