DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17283 and AT1G03230

DIOPT Version :9

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_563679.1 Gene:AT1G03230 / 838532 AraportID:AT1G03230 Length:434 Species:Arabidopsis thaliana


Alignment Length:404 Identity:83/404 - (20%)
Similarity:135/404 - (33%) Gaps:109/404 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 KNTANMEYTCKMNIGTPKQKFTVLPDTGSSNIWVP-----------GPHCKSKACKKHKQ----- 191
            |:.:.::||..:|..||....:|:.|.|....||.           .|.|.|..|.:...     
plant    38 KDPSTLQYTTVINQRTPLVPASVVFDLGGREFWVDCDQGYVSTTYRSPRCNSAVCSRAGSIACGT 102

  Fly   192 -YHPAKSSTYVKNGKSFAITYGSG-SVAGVLAKDTVRIAGLVVTNQTFAMTTKEPGTTFVTSNFD 254
             :.|.:.........:|.....:| :.:|..|.|.|.|.....:|.  ....|.|...|...:..
plant   103 CFSPPRPGCSNNTCGAFPDNSITGWATSGEFALDVVSIQSTNGSNP--GRFVKIPNLIFSCGSTS 165

  Fly   255 GILGL-----GYRSIAVDNVKTLVQNMCSEDVITSCKFAICMKGGGSSSRGGAIIFGSSNTSAYS 314
            .:.||     |...:...|:...:|...:...  :.|||:|:    :|.||          .|:.
plant   166 LLKGLAKGAVGMAGMGRHNIGLPLQFAAAFSF--NRKFAVCL----TSGRG----------VAFF 214

  Fly   315 GSNSYTYTP------------VTKKGYWQF-----------------------------TLQDIY 338
            |:..|.:.|            :...|...|                             ||..|.
plant   215 GNGPYVFLPGIQISRLQKTPLLINPGTTVFEFSKGEKSPEYFIGVTAIKIVEKTLPIDPTLLKIN 279

  Fly   339 ----VGGTKVSGSVQAIVDSGTSLITAPT------AIYNKINKVIGCRATSSGECW-------MK 386
                :||||:| ||.......:|:..|.|      |....|.:|...:  ..|.|:       .:
plant   280 ASTGIGGTKIS-SVNPYTVLESSIYKAFTSEFIRQAAARSIKRVASVK--PFGACFSTKNVGVTR 341

  Fly   387 CAKKIPDFTFVIAGKKFV--VKGNKMKLKVRTNRGRTVCISAVT--EVPDEPVILGDAFIRHFCT 447
            ....:|:...|:..|..|  :.|....:.|..:   .:|:..|.  ..|...|::|...:.....
plant   342 LGYAVPEIQLVLHSKDVVWRIFGANSMVSVSDD---VICLGFVDGGVNPGASVVIGGFQLEDNLI 403

  Fly   448 EFDLANNRIGFAAT 461
            |||||:|:.||::|
plant   404 EFDLASNKFGFSST 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 81/400 (20%)
Asp 149..460 CDD:278455 81/395 (21%)
AT1G03230NP_563679.1 xylanase_inhibitor_I_like 50..418 CDD:133156 80/392 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.