DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17283 and AT3G59080

DIOPT Version :9

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_191467.1 Gene:AT3G59080 / 825077 AraportID:AT3G59080 Length:535 Species:Arabidopsis thaliana


Alignment Length:556 Identity:105/556 - (18%)
Similarity:186/556 - (33%) Gaps:140/556 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ICLLVILTEARQRKVNHSADRRSLAVRSGHRN-----------------ERSSALHGRGLAARSR 59
            :||:.....|      .|.|.|:||..:..:|                 ..||..:..|.::..:
plant     9 LCLIFFFVTA------FSGDSRALAGNNEQKNISGFSGIDFPNPMRFGSASSSTSNDCGFSSPEK 67

  Fly    60 NQRKRRLNAAKR-----SRRKRNLARK--SNRKIRAKTESIVRSDSSYATLPLDFQQNFVRTTDN 117
            ...|.|....|.     .||:.....|  :|..:..:...:.|..:.:..:.....||.|.....
plant    68 EPTKERTGENKTVKFHLKRRETTTTEKATTNSVLELQIRDLTRIQTLHKRVLEKNNQNTVSQKQK 132

  Fly   118 LRSEKAFLANRYGFSFAKSSG--TATLKNTANM---EYTCKMNIGTPKQKFTVLPDTGSSNIWVP 177
            ...::.........|..:.:|  .|||::...:   ||...:.:|:|.:.|:::.||||...|:.
plant   133 KNDKEVVTTTPVASSVEEQAGQLVATLESGMTLGSGEYFMDVLVGSPPKHFSLILDTGSDLNWIQ 197

  Fly   178 GPHCKSKACKKHKQYHPAKSSTYVKN-------------------GKS------FAITYG-SGSV 216
            ...|.....:....|.|..|::| ||                   .||      :...|| |.:.
plant   198 CLPCYDCFQQNGAFYDPKASASY-KNITCNDQRCNLVSSPDPPMPCKSDNQSCPYYYWYGDSSNT 261

  Fly   217 AGVLAKDTVRIAGLVVTNQTFAMTTKEPGTTFVTSNFD--------GILGLGYRSIAVDNVKTLV 273
            .|..|.:|..:.  :.||...:.........|...:::        |:||||...:   :..:.:
plant   262 TGDFAVETFTVN--LTTNGGSSELYNVENMMFGCGHWNRGLFHGAAGLLGLGRGPL---SFSSQL 321

  Fly   274 QNMCSEDVITSCKFAICMKGGGSSSR-GGAIIFGSSN----------TSAYSGSNSYTYTPVTKK 327
            |::...      .|:.|:....|.:. ...:|||...          ||..:|..:...|     
plant   322 QSLYGH------SFSYCLVDRNSDTNVSSKLIFGEDKDLLSHPNLNFTSFVAGKENLVDT----- 375

  Fly   328 GYWQFTLQDIYVGGTKVS-----------GSVQAIVDSGTSLITAPTAIYNKINKVIGCRATSSG 381
             ::...::.|.|.|..::           |:...|:||||:|.......|..|...|..:|..  
plant   376 -FYYVQIKSILVAGEVLNIPEETWNISSDGAGGTIIDSGTTLSYFAEPAYEFIKNKIAEKAKG-- 437

  Fly   382 ECWMKCAKKIPDF-TFVIAGKKFVVKG----NKMKLKVRTNRGRT----------------VCIS 425
                    |.|.: .|.|....|.|.|    ...:|.:....|..                ||::
plant   438 --------KYPVYRDFPILDPCFNVSGIHNVQLPELGIAFADGAVWNFPTENSFIWLNEDLVCLA 494

  Fly   426 AVTEVPDEPVILGDAFIRHFCTEFDLANNRIGFAAT 461
            .:........|:|:...::|...:|...:|:|:|.|
plant   495 MLGTPKSAFSIIGNYQQQNFHILYDTKRSRLGYAPT 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 76/396 (19%)
Asp 149..460 CDD:278455 75/387 (19%)
AT3G59080NP_191467.1 PTZ00165 108..>228 CDD:240300 26/120 (22%)
pepsin_A_like_plant 169..532 CDD:133143 77/390 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13683
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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