DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17283 and AT2G42980

DIOPT Version :9

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_181826.1 Gene:AT2G42980 / 818900 AraportID:AT2G42980 Length:527 Species:Arabidopsis thaliana


Alignment Length:553 Identity:105/553 - (18%)
Similarity:189/553 - (34%) Gaps:171/553 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SADRRSLAVRSGH----------------RNERSSALHGRGLAARSRNQRKR--RLNAAKRSRRK 75
            |.|.|:|:.:..|                .:..||..:..|.:::..:..|.  |.:...:||.|
plant    21 SGDCRTLSGKHEHYSSSLNMFNSQDTMRFSSASSSTSNDCGFSSKEHDPSKEHTRESVKPQSRIK 85

  Fly    76 RNLARKSNRKIRAKTESIVRSDSSYATLPLDFQQNFVRTTDNLRSEKAFLANRYGFSFAKSSG-- 138
            :...|.::..:..:.:.:.|..:.:|......:|...:....:.|:.:.:.     :...|.|  
plant    86 QETKRTTHSVVDLQIQDLTRIKTLHARFNKSKKQKNEKVRKKITSDISLVG-----APEVSPGKL 145

  Fly   139 TATLKNTANM---EYTCKMNIGTPKQKFTVLPDTGSSNIWVPGPHCKSKAC-KKHKQYHPAKSST 199
            .|||::...:   ||...:.:|||.:.|:::.||||...|:....|..  | .::..::..|:|.
plant   146 IATLESGMTLGSGEYFMDVLVGTPPKHFSLILDTGSDLNWLQCLPCYD--CFHQNGMFYDPKTSA 208

  Fly   200 YVKNGKSFAIT------------------------------YGSGS-VAGVLAKDTVRIAGLVVT 233
            ..||     ||                              ||..| ..|..|.:|.        
plant   209 SFKN-----ITCNDPRCSLISSPDPPVQCESDNQSCPYFYWYGDRSNTTGDFAVETF-------- 260

  Fly   234 NQTFAMTTKEPGTT----------------FVTSNFDGILGLGYRSIAVDNVKTLVQNMCSEDVI 282
              |..:||.|.|::                .:.|...|:||||...:   :..:.:|::...   
plant   261 --TVNLTTTEGGSSEYKVGNMMFGCGHWNRGLFSGASGLLGLGRGPL---SFSSQLQSLYGH--- 317

  Fly   283 TSCKFAICMKGGGSSSR-GGAIIFGSSN----------TSAYSGSNSYTYTPVTKKGYWQFTLQD 336
               .|:.|:....|::. ...:|||...          ||..:|..:...|      ::...::.
plant   318 ---SFSYCLVDRNSNTNVSSKLIFGEDKDLLNHTNLNFTSFVNGKENSVET------FYYIQIKS 373

  Fly   337 IYVGGTKV-----------SGSVQAIVDSGTSLITAPTAIYNKINKVIGCRATSSGECWMKCAKK 390
            |.|||..:           .|....|:||||:|.......|..|..              |.|:|
plant   374 ILVGGKALDIPEETWNISSDGDGGTIIDSGTTLSYFAEPAYEIIKN--------------KFAEK 424

  Fly   391 I----PDF-TFVIAGKKFVVKG---NKM---KLKVRTNRGRT----------------VCISAVT 428
            :    |.| .|.:....|.|.|   |.:   :|.:....|..                ||::.:.
plant   425 MKENYPIFRDFPVLDPCFNVSGIEENNIHLPELGIAFVDGTVWNFPAENSFIWLSEDLVCLAILG 489

  Fly   429 EVPDEPVILGDAFIRHFCTEFDLANNRIGFAAT 461
            .......|:|:...::|...:|...:|:||..|
plant   490 TPKSTFSIIGNYQQQNFHILYDTKRSRLGFTPT 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 81/416 (19%)
Asp 149..460 CDD:278455 81/407 (20%)
AT2G42980NP_181826.1 PLN03146 110..525 CDD:178691 90/464 (19%)
pepsin_A_like_plant 159..524 CDD:133143 82/410 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13683
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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