DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17283 and ctsd

DIOPT Version :9

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_571785.2 Gene:ctsd / 65225 ZFINID:ZDB-GENE-010131-8 Length:398 Species:Danio rerio


Alignment Length:388 Identity:141/388 - (36%)
Similarity:209/388 - (53%) Gaps:28/388 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 TESIVRSDSSYATLPLDFQQNFVRT-TDNLRSEKAFLAN----RYGFSFAKSSGTA--TLKNTAN 147
            :::|||       :||...:...|| :|:.||.:..:::    :|...|..|:...  ||||..:
Zfish    16 SDAIVR-------IPLKKFRTLRRTLSDSGRSLEELVSSSNSLKYNLGFPASNDPTPETLKNYLD 73

  Fly   148 MEYTCKMNIGTPKQKFTVLPDTGSSNIWVPGPHCK--SKACKKHKQYHPAKSSTYVKNGKSFAIT 210
            .:|..::.:|||.|.|||:.||||||:|||..||.  ..||..|.:|:..|||||||||..|||.
Zfish    74 AQYYGEIGLGTPVQTFTVVFDTGSSNLWVPSVHCSLTDIACLLHHKYNGGKSSTYVKNGTQFAIQ 138

  Fly   211 YGSGSVAGVLAKDTVRIAGLVVTNQTFAMTTKEPGTTFVTSNFDGILGLGYRSIAVDNVKTLVQN 275
            |||||::|.|::||..|..:.|..|.|....|:||..|:.:.||||||:.|..||||.|..:...
Zfish   139 YGSGSLSGYLSQDTCTIGDIAVEKQIFGEAIKQPGVAFIAAKFDGILGMAYPRIAVDGVPPVFDM 203

  Fly   276 MCSEDVITSCKFAICMKGGGSSSRGGAIIFGSSNTSAYSGSNSYTYTPVTKKGYWQFTLQDIYVG 340
            |.|:..:....|:..:.....:..||.::.|.::...|:|  .:.|..::::.|||..:..:.:|
Zfish   204 MMSQKKVEKNVFSFYLNRNPDTQPGGELLLGGTDPKYYTG--DFNYVDISRQAYWQIHMDGMSIG 266

  Fly   341 G--TKVSGSVQAIVDSGTSLITAPTAIYNKINKVIGCRATSSGECWMKCAK--KIPDFTFVIAGK 401
            .  :...|..:||||:||||||.|.|....:.|.||......||..:.|.|  .:|..:|.:.||
Zfish   267 SGLSLCKGGCEAIVDTGTSLITGPAAEVKALQKAIGAIPLMQGEYMVDCKKVPTLPTISFSLGGK 331

  Fly   402 KFVVKGNKMKLKVRTNRGRTVCISAVTEV----PDEPV-ILGDAFIRHFCTEFDLANNRIGFA 459
            .:.:.|.:..|| .:..|..:|:|....:    |..|: ||||.||..:.|.||..|||:|||
Zfish   332 VYSLTGEQYILK-ESQGGHDICLSGFMGLDIPPPAGPLWILGDVFIGQYYTVFDRENNRVGFA 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 125/327 (38%)
Asp 149..460 CDD:278455 124/322 (39%)
ctsdNP_571785.2 A1_Propeptide 19..44 CDD:285240 10/31 (32%)
Cathepsin_D2 70..394 CDD:133157 125/327 (38%)
Asp 75..395 CDD:278455 124/322 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.790

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