DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17283 and Napsa

DIOPT Version :9

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_113858.1 Gene:Napsa / 60575 RGDID:61940 Length:420 Species:Rattus norvegicus


Alignment Length:352 Identity:116/352 - (32%)
Similarity:185/352 - (52%) Gaps:28/352 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 YGF------SFAKSSGTAT----LKNTANMEYTCKMNIGTPKQKFTVLPDTGSSNIWVPGPHCK- 182
            ||:      |...:||..|    |....|.:|...:.:|||.|.|||:.||||||:|||...|. 
  Rat    43 YGWEQRAELSRTPTSGGKTAFVPLSKFMNTQYFGDIGLGTPPQNFTVVFDTGSSNLWVPSTRCHF 107

  Fly   183 -SKACKKHKQYHPAKSSTYVKNGKSFAITYGSGSVAGVLAKDTVRIAGLVVTNQTFAMTTKEPGT 246
             |.||..|.:::|..||::..||..|||.||:|.::|:|::|.:.|.|:...:.||.....||..
  Rat   108 FSLACWFHHRFNPKASSSFRPNGTKFAIQYGTGRLSGILSRDNLTIGGIHNVSVTFGEALWEPSL 172

  Fly   247 TFVTSNFDGILGLGYRSIAVDNVKTLVQNMCSEDVITSCKFAICMKGGGSSSRGGAIIFGSSNTS 311
            .|..:.||||||||:.::||..|:..:..:..:.::....|:..:......|.||.::.|.|:..
  Rat   173 VFALARFDGILGLGFPTLAVGGVQPPLDALVEQRLLEKPVFSFYLNRDSEGSDGGELVLGGSDPD 237

  Fly   312 AYSGSNSYTYTPVTKKGYWQFTLQDIYVGGTKVSGSVQ---AIVDSGTSLITAPTAIYNKINKVI 373
            .|  ....|:.|||...|||..:|.:.| ||.::...|   ||:|:||||||.|:.....:||.:
  Rat   238 HY--VPPLTFIPVTIPAYWQVHMQSVKV-GTGLNLCAQGCGAILDTGTSLITGPSEEIRALNKAV 299

  Fly   374 GCRATSSGECWMKCAK--KIPDFTFVIAGKKFVVKGNKMKLKV-RTNRGRTVCISAVTEV----P 431
            |.....:|:..::|:|  ::|..:|.:.|..|.:.|....:|: :::.|  :|:.....:    |
  Rat   300 GGFPLLTGQYLIQCSKIPELPTVSFSLGGVWFNLTGQDYVIKILQSDVG--LCLLGFQALDIPKP 362

  Fly   432 DEPV-ILGDAFIRHFCTEFDLANNRIG 457
            :.|: ||||.|:..:...||..:..||
  Rat   363 EGPLWILGDVFLGSYVAVFDRGDKNIG 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 110/329 (33%)
Asp 149..460 CDD:278455 108/322 (34%)
NapsaNP_113858.1 pepsin_retropepsin_like 69..395 CDD:299705 109/326 (33%)
Asp 73..397 CDD:278455 108/322 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.790

Return to query results.
Submit another query.