DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17283 and Bace2

DIOPT Version :9

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_062390.3 Gene:Bace2 / 56175 MGIID:1860440 Length:514 Species:Mus musculus


Alignment Length:444 Identity:110/444 - (24%)
Similarity:180/444 - (40%) Gaps:111/444 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LARKSNRKIRA----KTESIVRSDS-SYATLPLDFQQNFVRTTDNLRSEKAFLANRYGFSFAKSS 137
            :||.:|.:..|    .|..:.|:|. :.|..|:....||:...|||:.:               |
Mouse    35 VARATNHRASAVPGLGTPELPRADGLALALEPVRATANFLAMVDNLQGD---------------S 84

  Fly   138 GTATLKNTANMEYTCKMNIGTPKQKFTVLPDTGSSNIWVPG-PHCKSKACKKHKQYHPAKSSTYV 201
            |..         |..:|.||||.||..:|.||||||..|.| ||.....     .:....||||.
Mouse    85 GRG---------YYLEMLIGTPPQKVQILVDTGSSNFAVAGAPHSYIDT-----YFDSESSSTYH 135

  Fly   202 KNGKSFAITYGSGSVAGVLAKDTVRI-AGLVVTNQTFAMTTKEPGTTFVTSNF-------DGILG 258
            ..|....:.|..||..|.:.:|.|.| .|.   |.:|.:..   .|.|.:.||       :||||
Mouse   136 SKGFDVTVKYTQGSWTGFVGEDLVTIPKGF---NSSFLVNI---ATIFESENFFLPGIKWNGILG 194

  Fly   259 LGYRSIA--VDNVKTLVQNMCSEDVITSCKFAICMKG-----GGSSSRGGAIIFGSSNTSAYSGS 316
            |.|.::|  ..:::|...::.::..|... |::.|.|     .||.:.||:::.|....|.|.| 
Mouse   195 LAYAALAKPSSSLETFFDSLVAQAKIPDI-FSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKG- 257

  Fly   317 NSYTYTPVTKKGYWQFTLQDIYVGGTKVS------GSVQAIVDSGTSLITAPTAIYNKINKVIGC 375
             ...|||:.::.|:|..:..:.:||..::      .:.:|||||||:|:..|..:::.:.:.:..
Mouse   258 -DIWYTPIKEEWYYQIEILKLEIGGQNLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVAR 321

  Fly   376 RAT----SSG-------ECWMKCAKKIPDFTFVIAGKKFVVKGNKMKLKVR-TNRGRTVCISAVT 428
            .:.    |.|       .||.........|.             |:.:.:| .|..|:..|:.:.
Mouse   322 TSLIPEFSDGFWTGAQLACWTNSETPWAYFP-------------KISIYLRDENASRSFRITILP 373

  Fly   429 EVPDEP---------------------VILGDAFIRHFCTEFDLANNRIGFAAT 461
            ::..:|                     :::|...:..|...||.|..|:|||.:
Mouse   374 QLYIQPMMGAGFNYECYRFGISSSTNALVIGATVMEGFYVVFDRAQRRVGFAVS 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 92/371 (25%)
Asp 149..460 CDD:278455 93/365 (25%)
Bace2NP_062390.3 beta_secretase_like 85..446 CDD:133140 95/379 (25%)
Asp 88..425 CDD:278455 92/363 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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