DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17283 and Bace

DIOPT Version :9

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001285756.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster


Alignment Length:365 Identity:157/365 - (43%)
Similarity:219/365 - (60%) Gaps:25/365 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 LPLDFQQNFVRTTDNLRSEKAFLANRYGFSFAKSSGTATLKNTANMEYTCKMNIGTPKQKFTVLP 167
            :|:..:||||:|..|:.:||::|..:|.....:|.....|.|:.||.|...::||||.|.|.||.
  Fly    22 VPILKEQNFVKTRQNVLAEKSYLRTKYQLPSLRSVDEEQLSNSMNMAYYGAISIGTPAQSFKVLF 86

  Fly   168 DTGSSNIWVPGPHCKSKACKKHKQYHPAKSSTYVKNGKSFAITYGSGSVAGVLAKDTVRIAGLVV 232
            |:||||:|||...|||.||..|.||..:.|||||.||:||:|.||:||:.|.|:.|||.:.||.:
  Fly    87 DSGSSNLWVPSNTCKSDACLTHNQYDSSASSTYVANGESFSIQYGTGSLTGYLSTDTVDVNGLSI 151

  Fly   233 TNQTFAMTTKEPGTTFVTSNFDGILGLGYRSIAVDNVKTLVQNMCSEDVITSCKFAICMKGGGSS 297
            .:||||.:|.||||.|..:|||||||:.|.|:|||.|.....||.|:.::.:..|:..:...|:|
  Fly   152 QSQTFAESTNEPGTNFNDANFDGILGMAYESLAVDGVAPPFYNMVSQGLVDNSVFSFYLARDGTS 216

  Fly   298 SRGGAIIFGSSNTSAYSGSNSYTYTPVTKKGYWQFTLQDIYVGGTKVSGSVQAIVDSGTSLITAP 362
            :.||.:|||.|:.|.|||  :.||.|::::||||||:....:.|..:....|||.|:|||||.||
  Fly   217 TMGGELIFGGSDASLYSG--ALTYVPISEQGYWQFTMAGSSIDGYSLCDDCQAIADTGTSLIVAP 279

  Fly   363 TAIYNKINKVIG--------CRATSSGECWMKCAKKIPDFTFVIAGKKFVVKGNKMKLKVRTNRG 419
            ...|..:::::.        |.:.||          :||.||.|.|..||:|.:...::...|  
  Fly   280 YNAYITLSEILNVGEDGYLDCSSVSS----------LPDVTFNIGGTNFVLKPSAYIIQSDGN-- 332

  Fly   420 RTVCISAVTEVPDEPVILGDAFIRHFCTEFDLANNRIGFA 459
               |:||...:..:..||||.||..:.|||||.|||||||
  Fly   333 ---CMSAFEYMGTDFWILGDVFIGQYYTEFDLGNNRIGFA 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 143/324 (44%)
Asp 149..460 CDD:278455 141/319 (44%)
BaceNP_001285756.1 pepsin_retropepsin_like 59..369 CDD:299705 143/326 (44%)
Asp 68..371 CDD:278455 141/319 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455534
Domainoid 1 1.000 97 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG1339
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I1684
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.800

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