DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17283 and Pgcl

DIOPT Version :9

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_525030.1 Gene:Pgcl / 30984 FlyBaseID:FBgn0011822 Length:407 Species:Drosophila melanogaster


Alignment Length:366 Identity:146/366 - (39%)
Similarity:205/366 - (56%) Gaps:12/366 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 SDSSYATLPLDFQQNFVRTTDNLRSEKAFLANRYGFSF-AKSSGTATLKNTANMEYTCKMNIGTP 159
            ::|:...:|:....||.|:..|:.:|:.|:..:|...: |.......|.|..|.:|...::||||
  Fly    22 ANSTLRRIPIQKSPNFKRSHKNIVAERDFVQQKYNRQYTANGYPMEHLSNYDNFQYYGNISIGTP 86

  Fly   160 KQKFTVLPDTGSSNIWVPGPHCKSKACKKHKQYHPAKSSTYVKNGKSFAITYGSGSVAGVLAKDT 224
            .|.|.|..||||||:||||..|.|.||:.|:.::..||||||.||.:|:||||:|||:|.|:.|.
  Fly    87 GQDFLVQFDTGSSNLWVPGSSCISTACQDHQVFYKNKSSTYVANGTAFSITYGTGSVSGYLSVDC 151

  Fly   225 VRIAGLVVTNQTFAMTTKEPGTTFVTSNFDGILGLGYRSIAVDNVKTLVQNMCSEDVITSCKFAI 289
            |..|||.:.:|||...|.|.||.||.:.||||||:|:.|:|||.|....|||..:.::.|..|:.
  Fly   152 VGFAGLTIQSQTFGEVTTEQGTNFVDAYFDGILGMGFPSLAVDGVTPTFQNMMQQGLVQSPVFSF 216

  Fly   290 CMKGGGS-SSRGGAIIFGSSNTSAYSGSNSYTYTPVTKKGYWQFTLQDIYVGGTKVSGSVQAIVD 353
            .::..|| :..||.:|.|.|:.|.|||  |.||..|.:..||:|....|.||.|.:|...|||.|
  Fly   217 FLRDNGSVTFYGGELILGGSDPSLYSG--SLTYVNVVQAAYWKFQTDYIKVGSTSISTFAQAIAD 279

  Fly   354 SGTSLITAPTAIYNKINKVIGCRATSSGECWMKCAKKIPDFTFVIAGKKFVVKGNKMKLKVRTNR 418
            :|||||.||.|.|::|:::....:....||   .:...||....|.|..|     |:..|.....
  Fly   280 TGTSLIIAPQAQYDQISQLFNANSEGLFEC---SSTSYPDLIININGVDF-----KIPAKYYIIE 336

  Fly   419 GRTVCISAVTEVPDEPVILGDAFIRHFCTEFDLANNRIGFA 459
            ....|..|:..:..:..|:||.|:....||||:.|.|:|||
  Fly   337 EEDFCSLAIQSINQDFWIMGDVFLGRIYTEFDVGNQRLGFA 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 134/317 (42%)
Asp 149..460 CDD:278455 133/312 (43%)
PgclNP_525030.1 pepsin_retropepsin_like 67..378 CDD:299705 136/321 (42%)
Asp 76..379 CDD:278455 133/312 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439940
Domainoid 1 1.000 97 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG1339
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I1684
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.800

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