DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17283 and Bace2

DIOPT Version :9

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001002802.1 Gene:Bace2 / 288227 RGDID:1303241 Length:514 Species:Rattus norvegicus


Alignment Length:479 Identity:112/479 - (23%)
Similarity:181/479 - (37%) Gaps:143/479 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SGHRNERSSALHGRGLAARSRNQRKRRLNAAKRSRRKRNLARKSNRKIRAKTESIVRSDS-SYAT 102
            :|..|.|:|.:.|.|                                    |..:.|:|. :.|.
  Rat    36 AGAANHRASTVPGLG------------------------------------TPELPRADGLALAL 64

  Fly   103 LPLDFQQNFVRTTDNLRSEKAFLANRYGFSFAKSSGTATLKNTANMEYTCKMNIGTPKQKFTVLP 167
            .|.....||:...|||:.:               ||..         |..:|.||||.||..:|.
  Rat    65 EPARATANFLAMVDNLQGD---------------SGRG---------YYLEMLIGTPPQKVRILV 105

  Fly   168 DTGSSNIWVPG-PHCKSKACKKHKQYHPAKSSTYVKNGKSFAITYGSGSVAGVLAKDTVRI-AGL 230
            ||||||..|.| ||.....     .:....||||...|....:.|..||..|.:.:|.|.| .|.
  Rat   106 DTGSSNFAVAGAPHSYIDT-----YFDSESSSTYHSKGFEVTVKYTQGSWTGFVGEDLVTIPKGF 165

  Fly   231 VVTNQTFAMTTKEPGTTFVTSNF-------DGILGLGYRSIA--VDNVKTLVQNMCSEDVITSCK 286
               |.:|.:..   .|.|.:.||       :|||||.|.::|  ..:::|...::.::..|... 
  Rat   166 ---NSSFLVNI---ATIFESENFFLPGIKWNGILGLAYAALAKPSSSLETFFDSLVAQAKIPDI- 223

  Fly   287 FAICMKG-----GGSSSRGGAIIFGSSNTSAYSGSNSYTYTPVTKKGYWQFTLQDIYVGGTKVS- 345
            |::.|.|     .||.:.||:::.|....|.|.|  ...|||:.::.|:|..:..:.:||..:: 
  Rat   224 FSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKG--DIWYTPIKEEWYYQIEILKLEIGGQSLNL 286

  Fly   346 -----GSVQAIVDSGTSLITAPTAIYNKINKVIGCRAT----SSG-------ECWMKCAKKIPDF 394
                 .:.:|||||||:|:..|..:::.:.:.:...:.    |.|       .||.........|
  Rat   287 DCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARTSLIPEFSDGFWTGAQLACWTNSETPWAYF 351

  Fly   395 TFVIAGKKFVVKGNKMKLKVR-TNRGRTVCISAVTEVPDEP---------------------VIL 437
            .             |:.:.:| .|..|:..|:.:.::..:|                     :::
  Rat   352 P-------------KISIYLRDENASRSFRITILPQLYIQPMMGAGFNYECYRFGISSSTNALVI 403

  Fly   438 GDAFIRHFCTEFDLANNRIGFAAT 461
            |...:..|...||.|..|:|||.:
  Rat   404 GATVMEGFYVVFDRAQRRVGFAVS 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 92/371 (25%)
Asp 149..460 CDD:278455 93/365 (25%)
Bace2NP_001002802.1 beta_secretase_like 85..446 CDD:133140 95/379 (25%)
Asp 88..425 CDD:278455 92/363 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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