DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17283 and Pgc

DIOPT Version :10

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_579818.1 Gene:Pgc / 24864 RGDID:3943 Length:392 Species:Rattus norvegicus


Alignment Length:386 Identity:126/386 - (32%)
Similarity:204/386 - (52%) Gaps:30/386 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 DSSYATLPLDFQQNFVRTT--------DNLRSEKAFLANRYGF-SFAKSSGTATLKNTANMEYTC 152
            ::|...:||. :...:|.|        |.|::.|.....:|.| :|...|.........:..|..
  Rat    15 EASLLRVPLR-KMKSIRETMKEQGVLKDFLKTHKYDPGQKYHFGNFGDYSVLYEPMAYMDASYFG 78

  Fly   153 KMNIGTPKQKFTVLPDTGSSNIWVPGPHCKSKACKKHKQYHPAKSSTYVKNGKSFAITYGSGSVA 217
            :::||||.|.|.||.||||||:||...:|:|:||..|.:::|:|||||...|::|::.||:||:.
  Rat    79 EISIGTPPQNFLVLFDTGSSNLWVSSVYCQSEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLT 143

  Fly   218 GVLAKDTVRIAGLVVTNQTFAMTTKEPGTTFVTSNFDGILGLGYRSIAVDNVKTLVQNMCSEDVI 282
            |....||:.:..:.|.||.|.::..||||.||.:.||||:||.|..::.....|.:|.|..|..:
  Rat   144 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGAL 208

  Fly   283 TSCKFAICMKGGGSSSRGGAIIFGSSNTSAYSGSNSYTYTPVTKKGYWQFTLQDIYVG----GTK 343
            :...|.:.: |....|.||.|:||..:.:.|:|  ..|:.|||::.|||.|:.|..:|    |..
  Rat   209 SQPLFGVYL-GSQQGSNGGQIVFGGVDKNLYTG--EITWVPVTQELYWQITIDDFLIGDQASGWC 270

  Fly   344 VSGSVQAIVDSGTSLITAPTAIYNKINKVIGCRATSSGECWMKC--AKKIPDFTFVIAGKKFVVK 406
            .|...|.|||:||||:..|....:::.:.||.:....||.::.|  ...:|..:||:.|.:|.:.
  Rat   271 SSQGCQGIVDTGTSLLVMPAQYLSELLQTIGAQEGEYGEYFVSCDSVSSLPTLSFVLNGVQFPLS 335

  Fly   407 GNKMKLKVRTNRGRTVCI-----SAVTEVPDEPV-ILGDAFIRHFCTEFDLANNRIGFAAT 461
            .:...:     :....|:     .::|....:|: ||||.|:|.:...||:.||::|.|.:
  Rat   336 PSSYII-----QEDNFCMVGLESISLTSESGQPLWILGDVFLRSYYAIFDMGNNKVGLATS 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 Asp 149..460 CDD:394983 113/322 (35%)
PgcNP_579818.1 A1_Propeptide 20..46 CDD:462326 6/26 (23%)
pepsin_retropepsin_like 73..391 CDD:472175 114/325 (35%)

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