DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17283 and Pgc

DIOPT Version :9

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_579818.1 Gene:Pgc / 24864 RGDID:3943 Length:392 Species:Rattus norvegicus


Alignment Length:386 Identity:126/386 - (32%)
Similarity:204/386 - (52%) Gaps:30/386 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 DSSYATLPLDFQQNFVRTT--------DNLRSEKAFLANRYGF-SFAKSSGTATLKNTANMEYTC 152
            ::|...:||. :...:|.|        |.|::.|.....:|.| :|...|.........:..|..
  Rat    15 EASLLRVPLR-KMKSIRETMKEQGVLKDFLKTHKYDPGQKYHFGNFGDYSVLYEPMAYMDASYFG 78

  Fly   153 KMNIGTPKQKFTVLPDTGSSNIWVPGPHCKSKACKKHKQYHPAKSSTYVKNGKSFAITYGSGSVA 217
            :::||||.|.|.||.||||||:||...:|:|:||..|.:::|:|||||...|::|::.||:||:.
  Rat    79 EISIGTPPQNFLVLFDTGSSNLWVSSVYCQSEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLT 143

  Fly   218 GVLAKDTVRIAGLVVTNQTFAMTTKEPGTTFVTSNFDGILGLGYRSIAVDNVKTLVQNMCSEDVI 282
            |....||:.:..:.|.||.|.::..||||.||.:.||||:||.|..::.....|.:|.|..|..:
  Rat   144 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGAL 208

  Fly   283 TSCKFAICMKGGGSSSRGGAIIFGSSNTSAYSGSNSYTYTPVTKKGYWQFTLQDIYVG----GTK 343
            :...|.:.: |....|.||.|:||..:.:.|:|  ..|:.|||::.|||.|:.|..:|    |..
  Rat   209 SQPLFGVYL-GSQQGSNGGQIVFGGVDKNLYTG--EITWVPVTQELYWQITIDDFLIGDQASGWC 270

  Fly   344 VSGSVQAIVDSGTSLITAPTAIYNKINKVIGCRATSSGECWMKC--AKKIPDFTFVIAGKKFVVK 406
            .|...|.|||:||||:..|....:::.:.||.:....||.::.|  ...:|..:||:.|.:|.:.
  Rat   271 SSQGCQGIVDTGTSLLVMPAQYLSELLQTIGAQEGEYGEYFVSCDSVSSLPTLSFVLNGVQFPLS 335

  Fly   407 GNKMKLKVRTNRGRTVCI-----SAVTEVPDEPV-ILGDAFIRHFCTEFDLANNRIGFAAT 461
            .:...:     :....|:     .::|....:|: ||||.|:|.:...||:.||::|.|.:
  Rat   336 PSSYII-----QEDNFCMVGLESISLTSESGQPLWILGDVFLRSYYAIFDMGNNKVGLATS 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 113/328 (34%)
Asp 149..460 CDD:278455 113/322 (35%)
PgcNP_579818.1 A1_Propeptide 18..46 CDD:400357 6/28 (21%)
pepsin_retropepsin_like 73..391 CDD:416259 114/325 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13683
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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