DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17283 and bace2

DIOPT Version :9

Sequence 1:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001135590.1 Gene:bace2 / 100216145 XenbaseID:XB-GENE-1014090 Length:499 Species:Xenopus tropicalis


Alignment Length:373 Identity:100/373 - (26%)
Similarity:159/373 - (42%) Gaps:76/373 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LKNTANMEYTCKMNIGTPKQKFTVLPDTGSSNIWVPG---PHCKSKACKKHKQYHPAKSST-YVK 202
            |:..:...|..::.||||.||..:|.||||||..|.|   |...:        :..:|.|| |..
 Frog    67 LEGDSGRGYYLELLIGTPPQKMNILVDTGSSNFAVAGALNPDITT--------FFDSKLSTSYEP 123

  Fly   203 NGKSFAITYGSGSVAGVLAKDTVRIAGLVVTNQTFAMTTKEPGTTFVTSNF-------DGILGLG 260
            ......:.|..||..|:|.||.:.:...|  |.||.:..   .:.|.:.||       .|||||.
 Frog   124 LNTQVTVRYTQGSWTGLLGKDVISMPKGV--NGTFLINI---ASIFQSENFFLPNINWQGILGLA 183

  Fly   261 YRSIA--VDNVKTLVQNMCSEDVITSCKFAICMKGGGSSSRG-----GAIIFGSSNTSAYSGSNS 318
            |.::|  ..:|:....::..::.|.:. |::.|.|.|..|.|     |:::.|....|.|.|  .
 Frog   184 YSTLAKPSSSVEPFFDSLVQQENIPNI-FSMQMCGAGQPSPGIGINAGSLVLGGIEPSLYQG--D 245

  Fly   319 YTYTPVTKKGYWQFTLQDIYVGGTK------VSGSVQAIVDSGTSLITAPTAIYN-KINKVIGCR 376
            ..|||:|::.|:|..:....|||..      |..|.:|||||||:|:..|..::| .::.::   
 Frog   246 IWYTPITEEWYYQVEVLKFEVGGQNLNLDCTVYNSDKAIVDSGTTLLRLPDKVFNAMVDAIV--- 307

  Fly   377 ATS-----SGECW----MKCAKK-------IPDFTFVI----AGKKFVVKGNKMKLK-------V 414
            .||     :.|.|    :.|..|       .||.:..:    :.:.|     ::.||       |
 Frog   308 QTSLIQNFNAEFWAGLQLACWDKTQDPWNYFPDISIYLRDTNSSRSF-----RLTLKPQLYIQSV 367

  Fly   415 RTNRGRTVCISAVTEVPDEPVILGDAFIRHFCTEFDLANNRIGFAATT 462
            .|.:....|...........:::|...:..|...||.|..|:|||.::
 Frog   368 LTFQESLNCFRFGISQSASALVIGATVMEGFYVIFDRAEKRVGFAVSS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 98/368 (27%)
Asp 149..460 CDD:278455 98/362 (27%)
bace2NP_001135590.1 beta_secretase_like 72..433 CDD:133140 99/368 (27%)
Asp 75..412 CDD:278455 97/360 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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