DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur-8 and AT1G61180

DIOPT Version :9

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001031216.1 Gene:AT1G61180 / 842411 AraportID:AT1G61180 Length:899 Species:Arabidopsis thaliana


Alignment Length:598 Identity:134/598 - (22%)
Similarity:239/598 - (39%) Gaps:144/598 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 RPKMVTVKHPE------SNKPKPTTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSITVIPST 178
            :|..|....||      .||....|..|.|:..:. ..:..|:||  |:. |.|:....|:...|
plant   302 KPMQVNCLEPEDAWELFKNKVGDNTLSSDPVIVEL-AREVAQKCR--GLP-LALNVIGETMSSKT 362

  Fly   179 -VKECVHLTELYLYS--------NKIGQLPPEIGCLVSLRNLALNENSLTSL-PESLQNCSQLKV 233
             |:|..|...::..|        |||               |.:.:.|..|| .|.:::|.....
plant   363 MVQEWEHAIHVFNTSAAEFSDMQNKI---------------LPILKYSYDSLGDEHIKSCFLYCA 412

  Fly   234 L-----DLRHNKLAEI---------PPVIYRLRS-----LTTLYLRFNRITAVA-------DDLR 272
            |     ::.:.||.:.         ..||.|.|:     |.|| .|.|.:|.|.       |.:|
plant   413 LFPEDGEIYNEKLIDYWICEGFIGEDQVIKRARNKGYAMLGTL-TRANLLTKVGTYYCVMHDVVR 476

  Fly   273 QLVNLTMLS----LRENKIRELGSAI---------GALVNLTTLDVSHNHLEHLPEDIGNCVNLS 324
            ::. |.:.|    .:||.:.:.|..:         ||:..::.:|   |.:|.:..: ..|..|:
plant   477 EMA-LWIASDFGKQKENFVVQAGVGLHEIPKVKDWGAVRKMSLMD---NDIEEITCE-SKCSELT 536

  Fly   325 ALDLQHNELLDIPDS-IGNLKSLVRLGMRYNR-LSSVPATLKNCKSMDEFNVEGNGITQLPDGML 387
            .|.||.|:|.::|.: |..::.||.|.:.||| .:.:|..:....|:...::....|..:|.| |
plant   537 TLFLQSNKLKNLPGAFIRYMQKLVVLDLSYNRDFNKLPEQISGLVSLQFLDLSNTSIEHMPIG-L 600

  Fly   388 ASLSGLTTITLS-RNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL-NMKENM 450
            ..|..||.:.|: .::..|  ..|.::..::..:.|..:::    :|..|..|.|.:| |::|..
plant   601 KELKKLTFLDLTYTDRLCS--ISGISRLLSLRLLRLLGSKV----HGDASVLKELQQLQNLQELA 659

  Fly   451 LTALPLDIGTWVNMVEL--NLATNALQKLPDD---IMNLQNLEILILSNNMLKKIPNTIGNLRKL 510
            :|.....|.....:.:|  ||......:.|.|   :.:::||..|.:.|:...:|        |.
plant   660 ITVSAELISLDQRLAKLISNLCIEGFLQKPFDLSFLASMENLSSLRVENSYFSEI--------KC 716

  Fly   511 RILDLEENRIEVLPH----------EIGLLHELQRL---ILQTNQITML---PRSIGHL------ 553
            |..:.|.:.:.:.|.          ||...|.::.|   :...|.:.:|   .|.:|.:      
plant   717 RESETESSYLRINPKIPCFTNLSRLEIMKCHSMKDLTWILFAPNLVVLLIEDSREVGEIINKEKA 781

  Fly   554 GNLTHLSVSENNLQFLPEE---IGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPLST 615
            .|||.::      .||..|   :.:|..||::|.:..|....|..:::.|..|:.|.::...:|.
plant   782 TNLTSIT------PFLKLEWLILYNLPKLESIYWSPLPFPVLLTMDVSNCPKLRKLPLNATSVSK 840

  Fly   616 I---------PPE 619
            :         |||
plant   841 VEEFEIHMYPPPE 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380 6/21 (29%)
leucine-rich repeat 185..207 CDD:275380 4/29 (14%)
LRR_RI 204..401 CDD:238064 57/239 (24%)
LRR_8 207..264 CDD:290566 18/76 (24%)
leucine-rich repeat 208..230 CDD:275380 6/22 (27%)
leucine-rich repeat 231..253 CDD:275380 6/35 (17%)
LRR_8 252..310 CDD:290566 19/82 (23%)
leucine-rich repeat 254..276 CDD:275380 9/28 (32%)
leucine-rich repeat 277..299 CDD:275380 7/34 (21%)
LRR_8 299..356 CDD:290566 18/58 (31%)
leucine-rich repeat 300..322 CDD:275380 4/21 (19%)
leucine-rich repeat 323..345 CDD:275380 8/22 (36%)
LRR_8 344..403 CDD:290566 16/60 (27%)
leucine-rich repeat 346..368 CDD:275380 7/22 (32%)
leucine-rich repeat 369..392 CDD:275380 5/22 (23%)
LRR_RI <379..566 CDD:238064 45/215 (21%)
leucine-rich repeat 417..440 CDD:275380 3/22 (14%)
leucine-rich repeat 441..486 CDD:275380 11/50 (22%)
LRR_8 463..520 CDD:290566 13/61 (21%)
leucine-rich repeat 487..507 CDD:275380 4/19 (21%)
leucine-rich repeat 510..532 CDD:275380 5/31 (16%)
LRR_8 532..588 CDD:290566 15/70 (21%)
leucine-rich repeat 556..578 CDD:275380 6/24 (25%)
leucine-rich repeat 603..626 CDD:275380 6/26 (23%)
AT1G61180NP_001031216.1 NB-ARC 156..440 CDD:279299 33/156 (21%)
leucine-rich repeat 513..534 CDD:275378 4/24 (17%)
LRR_8 533..593 CDD:290566 16/59 (27%)
leucine-rich repeat 535..558 CDD:275378 8/22 (36%)
leucine-rich repeat 559..582 CDD:275378 7/22 (32%)
leucine-rich repeat 583..605 CDD:275378 5/22 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D287114at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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