DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur-8 and LRRC8C

DIOPT Version :10

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:XP_006711023.1 Gene:LRRC8C / 84230 HGNCID:25075 Length:808 Species:Homo sapiens


Alignment Length:526 Identity:132/526 - (25%)
Similarity:220/526 - (41%) Gaps:145/526 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 NENNANMPPETRPKMVTVKHPESNKPKPTTKKSKPIQADQDVIKALQRCRDEGIKRLDLSKSSIT 173
            |.||...|.:.|.|:.|..|                                  .||:|....::
Human   409 NLNNEWTPDKLRQKLQTNAH----------------------------------NRLELPLIMLS 439

  Fly   174 VIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENS-------LTSLPESLQNCSQL 231
            .:|.||.|...|..|.|...|...:|..|..|.:|:.|:|::.|       |:.|.|:      |
Human   440 GLPDTVFEITELQSLKLEIIKNVMIPATIAQLDNLQELSLHQCSVKIHSAALSFLKEN------L 498

  Fly   232 KVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGA 296
            |||.::.:.:.|:||.:|.||:|..|||                                  :|:
Human   499 KVLSVKFDDMRELPPWMYGLRNLEELYL----------------------------------VGS 529

  Fly   297 LVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPA 361
            |        ||                   |:..|..|   :|:.:||||..|.::.| :|.:|.
Human   530 L--------SH-------------------DISRNVTL---ESLRDLKSLKILSIKSN-VSKIPQ 563

  Fly   362 TLKNCKS-MDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHN 425
            .:.:..| :.:..:..:| |:|.  ||.:|..:|.:|                     .:.|.|.
Human   564 AVVDVSSHLQKMCIHNDG-TKLV--MLNNLKKMTNLT---------------------ELELVHC 604

  Fly   426 RIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVN---MVELNLATNALQKLPDDIMNLQNL 487
            .:::||:.:|| ...|.:|::|||.|.::. :|.::.:   :..|.|..|::..:|:.|..|.:|
Human   605 DLERIPHAVFS-LLSLQELDLKENNLKSIE-EIVSFQHLRKLTVLKLWHNSITYIPEHIKKLTSL 667

  Fly   488 EILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGH 552
            |.|..|:|.::.:|:.:....|:|.|||..|.|..:|.|||:|..||...:..|::..||..:..
Human   668 ERLSFSHNKIEVLPSHLFLCNKIRYLDLSYNDIRFIPPEIGVLQSLQYFSITCNKVESLPDELYF 732

  Fly   553 LGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLKY--LNIDKCPLST 615
            ...|..|.:.:|:|..|..:||:|..|..|.:..| ..|.||.||..|:.||.  |.::.....|
Human   733 CKKLKTLKIGKNSLSVLSPKIGNLLFLSYLDVKGN-HFEILPPELGDCRALKRAGLVVEDALFET 796

  Fly   616 IPPEIQ 621
            :|.:::
Human   797 LPSDVR 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380 7/20 (35%)
LRR 185..535 CDD:443914 91/360 (25%)
leucine-rich repeat 185..207 CDD:275380 7/21 (33%)
leucine-rich repeat 208..230 CDD:275380 7/28 (25%)
leucine-rich repeat 231..253 CDD:275380 9/21 (43%)
leucine-rich repeat 254..276 CDD:275380 4/21 (19%)
leucine-rich repeat 277..299 CDD:275380 2/21 (10%)
leucine-rich repeat 300..322 CDD:275380 2/21 (10%)
leucine-rich repeat 323..345 CDD:275380 5/21 (24%)
leucine-rich repeat 346..368 CDD:275380 5/21 (24%)
leucine-rich repeat 369..392 CDD:275380 6/22 (27%)
leucine-rich repeat 417..440 CDD:275380 6/22 (27%)
leucine-rich repeat 441..486 CDD:275380 13/47 (28%)
PPP1R42 472..617 CDD:455733 48/146 (33%)
leucine-rich repeat 487..507 CDD:275380 6/19 (32%)
leucine-rich repeat 510..532 CDD:275380 11/21 (52%)
leucine-rich repeat 556..578 CDD:275380 8/21 (38%)
leucine-rich repeat 603..626 CDD:275380 5/21 (24%)
LRRC8CXP_006711023.1 Pannexin_like 6..343 CDD:463622
leucine-rich repeat 451..473 CDD:275378 7/21 (33%)
leucine-rich repeat 474..497 CDD:275380 6/22 (27%)
leucine-rich repeat 498..520 CDD:275380 9/21 (43%)
PPP1R42 <517..627 CDD:455733 40/199 (20%)
leucine-rich repeat 521..548 CDD:275380 13/90 (14%)
leucine-rich repeat 549..571 CDD:275380 5/22 (23%)
leucine-rich repeat 572..595 CDD:275380 6/25 (24%)
LRR <587..>777 CDD:443914 61/213 (29%)
leucine-rich repeat 596..618 CDD:275380 7/43 (16%)
leucine-rich repeat 619..643 CDD:275380 7/24 (29%)
leucine-rich repeat 644..666 CDD:275380 6/21 (29%)
leucine-rich repeat 667..689 CDD:275380 6/21 (29%)
leucine-rich repeat 713..735 CDD:275380 5/21 (24%)
leucine-rich repeat 736..757 CDD:275380 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.