DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sur-8 and RLP29

DIOPT Version :9

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_181808.1 Gene:RLP29 / 818880 AraportID:AT2G42800 Length:462 Species:Arabidopsis thaliana


Alignment Length:554 Identity:111/554 - (20%)
Similarity:178/554 - (32%) Gaps:258/554 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 NENNANMPPETRPKMVTV------------KHPE----------------------------SNK 133
            |..:|:|||.....:..:            .||.                            .:.
plant    29 NRVSASMPPSESETLFKIMESMSSDQQWRQSHPNPCAPGSSWPGIECKTGPDHLSHVSRLDFGSA 93

  Fly   134 PKPTTKKSKPIQADQDVIKALQ-----RCRDEGIKRLDLSKSSITVIPSTVKECV------HLTE 187
            |.|:.|.|....:....:..||     .|              .|..|:|:...:      .|.:
plant    94 PNPSCKSSASFPSSIFTLPFLQSVFFFNC--------------FTHFPTTIMFPIKLIPNSSLQQ 144

  Fly   188 LYLYSNK--IGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYR 250
            |.|.||.  .||:||.|..|.||:.|.|::|.||                      .:|||.|:.
plant   145 LSLRSNPSLSGQIPPRISSLKSLQILTLSQNRLT----------------------GDIPPAIFS 187

  Fly   251 LRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPE 315
            |:||..|.|.:|::|.                                                 
plant   188 LKSLVHLDLSYNKLTG------------------------------------------------- 203

  Fly   316 DIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLS-SVPATLKNCKSMDEFNVEGNGI 379
                               .||..:|||.:||.|.:.||.|: ::|.|                |
plant   204 -------------------KIPLQLGNLNNLVGLDLSYNSLTGTIPPT----------------I 233

  Fly   380 TQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKL 444
            :||  |||.                                                        
plant   234 SQL--GMLQ-------------------------------------------------------- 240

  Fly   445 NMKENMLTALPLDIGTWVNMVELNLATNAL-QKLPDDIMNLQNLEILILSNNMLK-KIPNTIGNL 507
                                 :|:|::|:| .::|:.:..|::|..:.||||.|| ..|..|.||
plant   241 ---------------------KLDLSSNSLFGRIPEGVEKLRSLSFMALSNNKLKGAFPKGISNL 284

  Fly   508 RKLRILDLEENRIEV-LPHEIGLLHELQRLILQTNQIT-MLPRSIGHLGNLTHLSVSENNLQ-FL 569
            :.|:...::.|.:.| ||.|:|.|.:||.|.|:.:..: ::|.|...|.||:.||::.|.|. .:
plant   285 QSLQYFIMDNNPMFVALPVELGFLPKLQELQLENSGYSGVIPESYTKLTNLSSLSLANNRLTGEI 349

  Fly   570 PEEIGSLESLENLYINQNPGLEKLPFELALCQNL 603
            |....||..:.:|.:::|..:..:||:.:..:.|
plant   350 PSGFESLPHVFHLNLSRNLLIGVVPFDSSFLRRL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380 3/26 (12%)
leucine-rich repeat 185..207 CDD:275380 11/23 (48%)
LRR_RI 204..401 CDD:238064 38/197 (19%)
LRR_8 207..264 CDD:290566 17/56 (30%)
leucine-rich repeat 208..230 CDD:275380 6/21 (29%)
leucine-rich repeat 231..253 CDD:275380 5/21 (24%)
LRR_8 252..310 CDD:290566 6/57 (11%)
leucine-rich repeat 254..276 CDD:275380 5/21 (24%)
leucine-rich repeat 277..299 CDD:275380 0/21 (0%)
LRR_8 299..356 CDD:290566 10/56 (18%)
leucine-rich repeat 300..322 CDD:275380 0/21 (0%)
leucine-rich repeat 323..345 CDD:275380 5/21 (24%)
LRR_8 344..403 CDD:290566 14/59 (24%)
leucine-rich repeat 346..368 CDD:275380 8/22 (36%)
leucine-rich repeat 369..392 CDD:275380 6/22 (27%)
LRR_RI <379..566 CDD:238064 43/190 (23%)
leucine-rich repeat 417..440 CDD:275380 0/22 (0%)
leucine-rich repeat 441..486 CDD:275380 6/45 (13%)
LRR_8 463..520 CDD:290566 19/58 (33%)
leucine-rich repeat 487..507 CDD:275380 9/20 (45%)
leucine-rich repeat 510..532 CDD:275380 8/22 (36%)
LRR_8 532..588 CDD:290566 17/57 (30%)
leucine-rich repeat 556..578 CDD:275380 8/22 (36%)
leucine-rich repeat 603..626 CDD:275380 1/1 (100%)
RLP29NP_181808.1 PLN00113 8..>383 CDD:215061 110/552 (20%)
leucine-rich repeat 142..166 CDD:275380 11/23 (48%)
leucine-rich repeat 167..190 CDD:275380 11/44 (25%)
leucine-rich repeat 191..214 CDD:275380 10/90 (11%)
leucine-rich repeat 215..238 CDD:275380 11/40 (28%)
leucine-rich repeat 239..262 CDD:275380 7/99 (7%)
leucine-rich repeat 263..286 CDD:275380 11/22 (50%)
leucine-rich repeat 287..310 CDD:275380 8/22 (36%)
leucine-rich repeat 311..334 CDD:275380 7/22 (32%)
leucine-rich repeat 335..356 CDD:275380 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45752
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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