DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur-8 and SHOC2

DIOPT Version :9

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001311265.1 Gene:SHOC2 / 8036 HGNCID:15454 Length:582 Species:Homo sapiens


Alignment Length:558 Identity:327/558 - (58%)
Similarity:420/558 - (75%) Gaps:7/558 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 AGGATGSTGSGQQP-TGSNGHSHLHNENNANMPPETRPKMVTVKHPESNKPKPTTKKSKPIQADQ 148
            |.|..|.....::| |..........:::|..|........|:|.|   .|.|.|:|.   .::.
Human    30 ASGGFGKESKEKEPKTKGKDAKDGKKDSSAAQPGVAFSVDNTIKRP---NPAPGTRKK---SSNA 88

  Fly   149 DVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLAL 213
            :|||.|.:||:|...||||||.||.::||::||...||||||||||:..||.|:||||:|..|||
Human    89 EVIKELNKCREENSMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLAL 153

  Fly   214 NENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLT 278
            :||||||||:||.|..:|::||||||||.|||.|:|||.|||||||||||||.|..|::.|..|:
Human   154 SENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLS 218

  Fly   279 MLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNL 343
            |||:|||||::|.:.||.|.||.||||:||.|||||::||||..::.||||||||||:||:||||
Human   219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNL 283

  Fly   344 KSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPT 408
            .||.|||:||||||::|.:|..|.:::|.|:|.|.|:.||:.:|:||..|.::||:||.|..||.
Human   284 SSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPV 348

  Fly   409 GGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNA 473
            |||:||:.:||:|:|||||:|||:|||||||.|:|||||:|.||:||||.|||.:|||||||||.
Human   349 GGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQ 413

  Fly   474 LQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLIL 538
            |.|:|:|:..|.:||:||||||:|||:|:.:|||||||.||||||::|.||:||..|.:||:|:|
Human   414 LTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVL 478

  Fly   539 QTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNL 603
            ..||:|.|||.||||.|||||.:.||.|..||||||:||:||.||:|.||.|..||||||||..|
Human   479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKL 543

  Fly   604 KYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQM 641
            ..::|:.||||.:||:|.|||||.::|:|||..|||.|
Human   544 SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380 12/20 (60%)
leucine-rich repeat 185..207 CDD:275380 16/21 (76%)
LRR_RI 204..401 CDD:238064 123/196 (63%)
LRR_8 207..264 CDD:290566 41/56 (73%)
leucine-rich repeat 208..230 CDD:275380 15/21 (71%)
leucine-rich repeat 231..253 CDD:275380 16/21 (76%)
LRR_8 252..310 CDD:290566 37/57 (65%)
leucine-rich repeat 254..276 CDD:275380 15/21 (71%)
leucine-rich repeat 277..299 CDD:275380 13/21 (62%)
LRR_8 299..356 CDD:290566 41/56 (73%)
leucine-rich repeat 300..322 CDD:275380 16/21 (76%)
leucine-rich repeat 323..345 CDD:275380 16/21 (76%)
LRR_8 344..403 CDD:290566 29/58 (50%)
leucine-rich repeat 346..368 CDD:275380 13/21 (62%)
leucine-rich repeat 369..392 CDD:275380 10/22 (45%)
LRR_RI <379..566 CDD:238064 119/186 (64%)
leucine-rich repeat 417..440 CDD:275380 17/22 (77%)
leucine-rich repeat 441..486 CDD:275380 30/44 (68%)
LRR_8 463..520 CDD:290566 39/56 (70%)
leucine-rich repeat 487..507 CDD:275380 13/19 (68%)
leucine-rich repeat 510..532 CDD:275380 14/21 (67%)
LRR_8 532..588 CDD:290566 35/55 (64%)
leucine-rich repeat 556..578 CDD:275380 14/21 (67%)
leucine-rich repeat 603..626 CDD:275380 12/22 (55%)
SHOC2NP_001311265.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..88 14/63 (22%)
LRR 1 101..122 11/20 (55%)
leucine-rich repeat 104..124 CDD:275380 12/19 (63%)
PLN00113 <115..>483 CDD:215061 235/367 (64%)
LRR 2 124..145 14/20 (70%)
leucine-rich repeat 125..147 CDD:275380 16/21 (76%)
LRR 3 147..169 15/21 (71%)
leucine-rich repeat 148..170 CDD:275380 15/21 (71%)
LRR 4 170..191 14/20 (70%)
leucine-rich repeat 171..193 CDD:275380 16/21 (76%)
LRR 5 193..214 15/20 (75%)
leucine-rich repeat 194..216 CDD:275380 15/21 (71%)
LRR 6 216..237 12/20 (60%)
leucine-rich repeat 217..239 CDD:275380 13/21 (62%)
LRR 7 239..260 15/20 (75%)
leucine-rich repeat 240..262 CDD:275380 16/21 (76%)
LRR 8 262..283 14/20 (70%)
leucine-rich repeat 263..285 CDD:275380 16/21 (76%)
LRR 9 285..307 13/21 (62%)
leucine-rich repeat 286..332 CDD:275380 23/45 (51%)
LRR 10 308..329 8/20 (40%)
LRR 11 332..353 11/20 (55%)
leucine-rich repeat 333..380 CDD:275380 30/46 (65%)
LRR 12 356..377 14/20 (70%)
LRR 13 380..400 13/19 (68%)
leucine-rich repeat 381..403 CDD:275380 16/21 (76%)
LRR 14 403..424 13/20 (65%)
leucine-rich repeat 404..426 CDD:275380 14/21 (67%)
LRR 15 426..448 14/21 (67%)
leucine-rich repeat 427..449 CDD:275380 15/21 (71%)
LRR 16 449..470 14/20 (70%)
leucine-rich repeat 450..472 CDD:275380 14/21 (67%)
PLN03150 <453..527 CDD:178695 47/73 (64%)
LRR 17 472..494 13/21 (62%)
leucine-rich repeat 473..495 CDD:275380 14/21 (67%)
LRR 18 495..516 14/20 (70%)
leucine-rich repeat 496..519 CDD:275380 15/22 (68%)
LRR 19 518..540 14/21 (67%)
LRR 20 542..563 9/20 (45%)
leucine-rich repeat 543..563 CDD:275380 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BCK5
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7219
Inparanoid 1 1.050 658 1.000 Inparanoid score I775
Isobase 1 0.950 - 1 Normalized mean entropy S1710
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D234290at33208
OrthoFinder 1 1.000 - - FOG0007307
OrthoInspector 1 1.000 - - oto90468
orthoMCL 1 0.900 - - OOG6_101852
Panther 1 1.100 - - LDO PTHR45752
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9772
SonicParanoid 1 1.000 - - X5412
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.810

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