DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sur-8 and erbin

DIOPT Version :10

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:XP_004910435.2 Gene:erbin / 734027 XenbaseID:XB-GENE-977040 Length:1446 Species:Xenopus tropicalis


Alignment Length:526 Identity:149/526 - (28%)
Similarity:227/526 - (43%) Gaps:128/526 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 TTKKSKPIQADQDVIKALQRCR-----DEGIKRLDLSKSSITVIPSTVKECV----HLTELYLYS 192
            |||:        :::..|..||     :|.:..||.|..|:..:|   ||..    .|.||||.:
 Frog     2 TTKR--------NLLVRLVPCRCLRGEEETVTSLDYSHCSLEQVP---KEIFTFEKTLEELYLDA 55

  Fly   193 NKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTL 257
            |:|.:||.::....||..|:|.:|.||.||.|:.|...|:.||:..|.:.|.|..|...:.||.:
 Frog    56 NQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIV 120

  Fly   258 YLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVN 322
            ....|.|:.:.|...||:|||.|.|.:                       ..|:.||.:.|....
 Frog   121 EASVNPISKLPDGFSQLLNLTQLYLND-----------------------AFLDFLPANFGRLTK 162

  Fly   323 LSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGML 387
            |..|:|:.|:|..:|.::..|..|.||.:..|..:.||..|:....:.||.::||.:|.:| |.|
 Frog   163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIP-GFL 226

  Fly   388 ASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLT 452
            .:|..||.:.:|:|                   |:|                             
 Frog   227 GNLKQLTYLDVSKN-------------------NIE----------------------------- 243

  Fly   453 ALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEE 517
                       |||            |.|...::|:.|:||:|.::::|.:||.|:||..|.::|
 Frog   244 -----------MVE------------DGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDE 285

  Fly   518 NRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENL 582
            |::..||..||.|..::.|....|:|..||.|||||..:...:...|.|..||.|||:.:|...|
 Frog   286 NQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVL 350

  Fly   583 YINQNPGLEKLPFELALCQNLKYLNIDKCPLSTIP---PEIQAGGPSLVLQWL-----KMHSPYR 639
            :::.|. ||.||.|:...|.||.:|:....|..:|   ..:|    .|...||     |...|.:
 Frog   351 FLHSNK-LESLPEEMGDMQKLKVINLSDNRLRNLPFSFTRLQ----QLTAMWLSDNQSKPLIPLQ 410

  Fly   640 QMXDVD 645
            :..|.|
 Frog   411 KETDQD 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380 7/24 (29%)
LRR 185..535 CDD:443914 96/349 (28%)
leucine-rich repeat 185..207 CDD:275380 9/21 (43%)
leucine-rich repeat 208..230 CDD:275380 10/21 (48%)
leucine-rich repeat 231..253 CDD:275380 7/21 (33%)
leucine-rich repeat 254..276 CDD:275380 7/21 (33%)
leucine-rich repeat 277..299 CDD:275380 4/21 (19%)
leucine-rich repeat 300..322 CDD:275380 4/21 (19%)
leucine-rich repeat 323..345 CDD:275380 7/21 (33%)
leucine-rich repeat 346..368 CDD:275380 7/21 (33%)
leucine-rich repeat 369..392 CDD:275380 9/22 (41%)
leucine-rich repeat 417..440 CDD:275380 2/22 (9%)
leucine-rich repeat 441..486 CDD:275380 5/44 (11%)
PPP1R42 472..617 CDD:455733 51/144 (35%)
leucine-rich repeat 487..507 CDD:275380 8/19 (42%)
leucine-rich repeat 510..532 CDD:275380 9/21 (43%)
leucine-rich repeat 556..578 CDD:275380 7/21 (33%)
leucine-rich repeat 603..626 CDD:275380 6/25 (24%)
erbinXP_004910435.2 leucine-rich repeat 24..47 CDD:275380 7/25 (28%)
leucine-rich repeat 48..70 CDD:275380 9/21 (43%)
LRR 67..424 CDD:443914 126/450 (28%)
leucine-rich repeat 71..93 CDD:275380 10/21 (48%)
leucine-rich repeat 94..139 CDD:275380 14/44 (32%)
leucine-rich repeat 117..131 CDD:275378 4/13 (31%)
leucine-rich repeat 140..162 CDD:275380 8/44 (18%)
leucine-rich repeat 163..185 CDD:275380 7/21 (33%)
leucine-rich repeat 186..208 CDD:275380 7/21 (33%)
leucine-rich repeat 209..231 CDD:275380 9/22 (41%)
leucine-rich repeat 232..254 CDD:275380 11/92 (12%)
leucine-rich repeat 255..278 CDD:275380 9/22 (41%)
leucine-rich repeat 279..300 CDD:275380 8/20 (40%)
leucine-rich repeat 301..336 CDD:275380 12/34 (35%)
leucine-rich repeat 337..369 CDD:275380 13/32 (41%)
leucine-rich repeat 370..390 CDD:275380 5/19 (26%)
PDZ_densin_erbin-like 1356..1442 CDD:467231
Blue background indicates that the domain is not in the aligned region.

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