DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sur-8 and LRCH2

DIOPT Version :10

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_065922.3 Gene:LRCH2 / 57631 HGNCID:29292 Length:765 Species:Homo sapiens


Alignment Length:470 Identity:111/470 - (23%)
Similarity:187/470 - (39%) Gaps:113/470 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AEGGGGSGNSGGGGKTSNGSAEAPTLCFAGGSGTAGAIAGTEELSNANSPANGAGGATGSTGSG- 95
            |...||.|||||||....||        :||.||||               .|.|||.|..|.| 
Human     2 AASQGGGGNSGGGGCGGGGS--------SGGCGTAG---------------GGGGGAGGGGGGGG 43

  Fly    96 -------QQPTGSNGHSHLHNENNANMPPETRPKMVTVKHPESNKPKPTTKKSKPIQADQDVIKA 153
                   ..||       |..:...|.||         .:|.|.:|:.|.:         .:.:|
Human    44 GTLVVPIPVPT-------LFGQPFPNGPP---------WNPGSLQPQHTVR---------SLDRA 83

  Fly   154 LQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSL 218
            |:.....||  |.||...:...|.:..:....|:..|..|:..::|.::.....|..|.|..|.:
Human    84 LEEAGSSGI--LSLSGRKLRDFPGSGYDLTDTTQADLSRNRFTEIPSDVWLFAPLETLNLYHNCI 146

  Fly   219 TSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLR 283
            .::||:::|...|..|::..|.|:.:|..::.|                        .|.:|.:.
Human   147 KTIPEAIKNLQMLTYLNISRNLLSTLPKYLFDL------------------------PLKVLVVS 187

  Fly   284 ENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVR 348
            .||:..:...||.|.:|..||:|.|.::.||:.:|...:|..|:::.|.|..:||.:|:| .||:
Human   188 NNKLVSIPEEIGKLKDLMELDISCNEIQVLPQQMGKLHSLRELNIRRNNLHVLPDELGDL-PLVK 251

  Fly   349 LGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQ 413
            |....|:::.:|...:....:....::.|.: |:|...:. |.|...|               .:
Human   252 LDFSCNKVTEIPVCYRKLHHLQVIILDNNPL-QVPPAQIC-LKGKVHI---------------FK 299

  Fly   414 FTNVYSINLEHNRIDKIP--YGIFSRAKGLTKLNMKENMLTALP-----LDIGTWVNMVELNLAT 471
            :.|:.:.    .|:||.|  ..:.|.:|.:....:.::|....|     .|.|...:..|..|:|
Human   300 YLNIQAC----CRMDKKPDSLDLPSLSKRMPSQPLTDSMEDFYPNKNHGPDSGIGSDNGEKRLST 360

  Fly   472 NALQKLPDDIMNLQN 486
            .  :...||.::|.:
Human   361 T--EPSDDDTVSLHS 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380 4/20 (20%)
LRR 185..535 CDD:443914 68/309 (22%)
leucine-rich repeat 185..207 CDD:275380 4/21 (19%)
leucine-rich repeat 208..230 CDD:275380 7/21 (33%)
leucine-rich repeat 231..253 CDD:275380 6/21 (29%)
leucine-rich repeat 254..276 CDD:275380 0/21 (0%)
leucine-rich repeat 277..299 CDD:275380 7/21 (33%)
leucine-rich repeat 300..322 CDD:275380 8/21 (38%)
leucine-rich repeat 323..345 CDD:275380 8/21 (38%)
leucine-rich repeat 346..368 CDD:275380 5/21 (24%)
leucine-rich repeat 369..392 CDD:275380 4/22 (18%)
leucine-rich repeat 417..440 CDD:275380 5/24 (21%)
leucine-rich repeat 441..486 CDD:275380 10/49 (20%)
PPP1R42 472..617 CDD:455733 3/15 (20%)
leucine-rich repeat 487..507 CDD:275380 111/470 (24%)
leucine-rich repeat 510..532 CDD:275380
leucine-rich repeat 556..578 CDD:275380
leucine-rich repeat 603..626 CDD:275380
LRCH2NP_065922.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39 23/59 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..76 7/29 (24%)
LRR 1 89..110 6/22 (27%)
leucine-rich repeat 92..112 CDD:275380 5/21 (24%)
LRR <108..>282 CDD:443914 46/198 (23%)
LRR 2 112..133 4/20 (20%)
leucine-rich repeat 113..135 CDD:275380 4/21 (19%)
LRR 3 135..156 6/20 (30%)
leucine-rich repeat 136..158 CDD:275380 7/21 (33%)
LRR 4 158..179 5/20 (25%)
leucine-rich repeat 159..174 CDD:275380 4/14 (29%)
LRR 5 180..201 6/20 (30%)
leucine-rich repeat 181..203 CDD:275380 7/21 (33%)
LRR 6 203..224 8/20 (40%)
leucine-rich repeat 204..226 CDD:275380 8/21 (38%)
LRR 7 226..248 8/22 (36%)
leucine-rich repeat 227..247 CDD:275380 7/19 (37%)
leucine-rich repeat 249..271 CDD:275380 5/21 (24%)
LRR 8 249..269 5/19 (26%)
LRR 9 271..292 3/22 (14%)
leucine-rich repeat 272..290 CDD:275380 3/18 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..401 12/60 (20%)
DUF5401 <434..539 CDD:375164
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..552
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 565..628
CH_LRCH2 643..753 CDD:409120
Blue background indicates that the domain is not in the aligned region.

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