DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur-8 and LRRC7

DIOPT Version :9

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001357714.1 Gene:LRRC7 / 57554 HGNCID:18531 Length:1575 Species:Homo sapiens


Alignment Length:508 Identity:151/508 - (29%)
Similarity:229/508 - (45%) Gaps:96/508 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 KHPESNKP--KPTTKKSKPIQADQDVIKALQRCR-----DEGIKRLDLSKSSITVIPSTVKECVH 184
            |.||....  :.|||:.        :|..|..||     :|.|..||.|..|:..:|   ||..:
Human    28 KRPEEELQCLEMTTKRK--------IIGRLVPCRCFRGEEEIISVLDYSHCSLQQVP---KEVFN 81

  Fly   185 ----LTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIP 245
                |.||||.:|:|.:||.::....:||.|::.:|.|::||.::.:...||.||:..|.:.|.|
Human    82 FERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFP 146

  Fly   246 PVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHL 310
            ..|...:.||.:....|.|:.:.|...||:|||.|.|.:..:..|.:..|.||.|..|::..|||
Human   147 ENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHL 211

  Fly   311 EHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVE 375
            :.||:.:.....|..|||.:||..::|:.:..:::|..|.|..|.|..:|               
Human   212 KTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLP--------------- 261

  Fly   376 GNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKG 440
                                                                     |...:.|.
Human   262 ---------------------------------------------------------GSIGKLKM 269

  Fly   441 LTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 505
            |..|:|.:|.:..:.:||.....:.:|.|::|.||:|||.|..|:.|..|.:.:|.|..:|||||
Human   270 LVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIG 334

  Fly   506 NLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLP 570
            ||..|...|...|.:|.||..||.||.|:.|.:..|.:..|||.||...|:|.:|:..|.|:|||
Human   335 NLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLP 399

  Fly   571 EEIGSLESLENLYINQNPGLEKLPFELALCQNLKYLNI-DKCPLSTIPPEIQA 622
            ||||.::.|..|.::.| .|:.|||.....:.|..|.: |....:.||.:.:|
Human   400 EEIGQMQKLRVLNLSDN-RLKNLPFSFTKLKELAALWLSDNQSKALIPLQTEA 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380 7/20 (35%)
leucine-rich repeat 185..207 CDD:275380 9/21 (43%)
LRR_RI 204..401 CDD:238064 51/196 (26%)
LRR_8 207..264 CDD:290566 18/56 (32%)
leucine-rich repeat 208..230 CDD:275380 7/21 (33%)
leucine-rich repeat 231..253 CDD:275380 8/21 (38%)
LRR_8 252..310 CDD:290566 19/57 (33%)
leucine-rich repeat 254..276 CDD:275380 7/21 (33%)
leucine-rich repeat 277..299 CDD:275380 7/21 (33%)
LRR_8 299..356 CDD:290566 18/56 (32%)
leucine-rich repeat 300..322 CDD:275380 7/21 (33%)
leucine-rich repeat 323..345 CDD:275380 7/21 (33%)
LRR_8 344..403 CDD:290566 6/58 (10%)
leucine-rich repeat 346..368 CDD:275380 6/21 (29%)
leucine-rich repeat 369..392 CDD:275380 0/22 (0%)
LRR_RI <379..566 CDD:238064 51/186 (27%)
leucine-rich repeat 417..440 CDD:275380 1/22 (5%)
leucine-rich repeat 441..486 CDD:275380 16/44 (36%)
LRR_8 463..520 CDD:290566 24/56 (43%)
leucine-rich repeat 487..507 CDD:275380 9/19 (47%)
leucine-rich repeat 510..532 CDD:275380 9/21 (43%)
LRR_8 532..588 CDD:290566 22/55 (40%)
leucine-rich repeat 556..578 CDD:275380 11/21 (52%)
leucine-rich repeat 603..626 CDD:275380 6/21 (29%)
LRRC7NP_001357714.1 leucine-rich repeat 64..85 CDD:275380 7/23 (30%)
LRR_8 85..140 CDD:338972 20/54 (37%)
leucine-rich repeat 86..108 CDD:275380 9/21 (43%)
leucine-rich repeat 109..131 CDD:275380 7/21 (33%)
LRR 130..440 CDD:227223 113/382 (30%)
leucine-rich repeat 132..177 CDD:275380 15/44 (34%)
leucine-rich repeat 178..200 CDD:275380 7/21 (33%)
leucine-rich repeat 201..223 CDD:275380 7/21 (33%)
leucine-rich repeat 224..246 CDD:275380 7/21 (33%)
leucine-rich repeat 247..269 CDD:275380 7/93 (8%)
leucine-rich repeat 270..292 CDD:275380 6/21 (29%)
leucine-rich repeat 316..336 CDD:275380 9/19 (47%)
leucine-rich repeat 339..361 CDD:275380 9/21 (43%)
leucine-rich repeat 362..384 CDD:275380 8/21 (38%)
leucine-rich repeat 385..407 CDD:275380 11/21 (52%)
leucine-rich repeat 408..430 CDD:275380 7/22 (32%)
PDZ_signaling 1485..1570 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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