DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sur-8 and lrrc8ab

DIOPT Version :10

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:XP_686175.1 Gene:lrrc8ab / 557928 ZFINID:ZDB-GENE-060531-43 Length:796 Species:Danio rerio


Alignment Length:516 Identity:141/516 - (27%)
Similarity:227/516 - (43%) Gaps:73/516 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 KALQRCRDEGIKRLDLSKSSITVIPSTVKE---CVHLTELY--LYSNKIGQLPPEIGCLVSLRNL 211
            ::|::...|.|:    .:||.:.||....:   .:|:.:.|  |||.:......|:. ...||.|
Zfish   332 RSLKKYSFESIR----EESSYSDIPDVKNDFAFMLHMIDQYDPLYSKRFAVFLSEVS-ENKLRQL 391

  Fly   212 AL-NENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLV 275
            .| ||.:|..|.:.:...||.| |:|....|:.||..::.|..|..|.|.......:...:.||.
Zfish   392 NLNNEWTLEKLRQRITKNSQEK-LELHLFMLSGIPDTVFDLVELEVLKLELIPDVTIPPIIAQLT 455

  Fly   276 NLTMLSLRENKIRELGSAIGAL-VNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLD---- 335
            ||..:.|.....:....|:..| .||.:|.:....::.:|..|.:..|||.|.|..|...|    
Zfish   456 NLREMWLYHTPAKIEAPALAFLRENLKSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSADNNRY 520

  Fly   336 -IPDSIGNLKSLVRLGMRYNRLSSVPATLKNC-KSMDEFNVEGNGITQLPDGMLASLSGLTTITL 398
             :.|.:..||.|..|.::.| |:.:|..:.:. ..:.:.::...| |:|.  :|.||.       
Zfish   521 IVIDGLRELKRLKVLRLKSN-LTKLPQVVTDVGMHLQKLSINNEG-TKLM--VLNSLK------- 574

  Fly   399 SRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALP--LDIGTW 461
                          :..|:..:.|....:::||:.||| ...|.::::|:|.|..:.  :.....
Zfish   575 --------------KMVNLSELELVRCDLERIPHSIFS-LHNLQEIDLKDNNLKTIEEIISFQHL 624

  Fly   462 VNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHE 526
            ..:|.|.|..|.:..:|..|..|.|||.|.|:.|.::|:|:.:...||:|.|||..|.:..:|.|
Zfish   625 HRLVCLKLWYNQIAYIPIQIGTLVNLERLYLNRNKIEKMPHQLFFCRKMRFLDLSHNNLTDIPSE 689

  Fly   527 IGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLE 591
            ||.|..||.|.:..|:|..||..:.....|..|::..|.||.||...|.|.||..|.:..| .||
Zfish   690 IGTLQNLQYLAVTANRIESLPPELFQCKKLRTLNLGNNCLQSLPSRFGELTSLTQLELRGN-RLE 753

  Fly   592 KLPFELALCQNLKY--LNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSPYRQMXDVDGVWRT 650
            .||.||..|:.||.  |.::....:|:|||::                       :.:|||
Zfish   754 CLPVELGECRLLKRSGLIVEDSIFNTLPPEVK-----------------------EQLWRT 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380 4/23 (17%)
LRR 185..535 CDD:443914 97/361 (27%)
leucine-rich repeat 185..207 CDD:275380 5/23 (22%)
leucine-rich repeat 208..230 CDD:275380 8/22 (36%)
leucine-rich repeat 231..253 CDD:275380 7/21 (33%)
leucine-rich repeat 254..276 CDD:275380 5/21 (24%)
leucine-rich repeat 277..299 CDD:275380 4/22 (18%)
leucine-rich repeat 300..322 CDD:275380 4/21 (19%)
leucine-rich repeat 323..345 CDD:275380 8/26 (31%)
leucine-rich repeat 346..368 CDD:275380 5/22 (23%)
leucine-rich repeat 369..392 CDD:275380 6/22 (27%)
leucine-rich repeat 417..440 CDD:275380 6/22 (27%)
leucine-rich repeat 441..486 CDD:275380 11/46 (24%)
PPP1R42 472..617 CDD:455733 55/146 (38%)
leucine-rich repeat 487..507 CDD:275380 7/19 (37%)
leucine-rich repeat 510..532 CDD:275380 10/21 (48%)
leucine-rich repeat 556..578 CDD:275380 9/21 (43%)
leucine-rich repeat 603..626 CDD:275380 7/24 (29%)
lrrc8abXP_686175.1 Pannexin_like 1..326 CDD:463622
leucine-rich repeat 434..456 CDD:275380 5/21 (24%)
leucine-rich repeat 457..480 CDD:275380 4/22 (18%)
LRR 477..>758 CDD:443914 89/307 (29%)
leucine-rich repeat 481..503 CDD:275380 4/21 (19%)
leucine-rich repeat 504..531 CDD:275380 8/26 (31%)
leucine-rich repeat 579..601 CDD:275380 6/22 (27%)
leucine-rich repeat 602..626 CDD:275380 4/23 (17%)
leucine-rich repeat 627..649 CDD:275380 7/21 (33%)
leucine-rich repeat 650..672 CDD:275380 7/21 (33%)
leucine-rich repeat 673..695 CDD:275380 10/21 (48%)
leucine-rich repeat 696..718 CDD:275380 7/21 (33%)
leucine-rich repeat 719..741 CDD:275380 9/21 (43%)
leucine-rich repeat 742..762 CDD:275380 9/20 (45%)
Blue background indicates that the domain is not in the aligned region.

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