DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur-8 and lrrc8e

DIOPT Version :10

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001007863.1 Gene:lrrc8e / 493249 XenbaseID:XB-GENE-6041092 Length:806 Species:Xenopus tropicalis


Alignment Length:554 Identity:137/554 - (24%)
Similarity:219/554 - (39%) Gaps:138/554 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 TGSGQQPTGSNGHS---HLHNENNA----------NMPPETRPKMVTVKHPESNKPKPTTKKSKP 143
            ||.|..|...|..:   ||.::.::          :...|:|.:.:.:.|     ..|..|..:.
 Frog   361 TGIGDIPDVKNDFAFVLHLVDQYDSLYSKRFAVFLSEVSESRLRQLNLNH-----EWPADKLRQK 420

  Fly   144 IQADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSL 208
            :|.           ..||  ||:|....:..:|.||.|...:..|.|.......:||.:..||.|
 Frog   421 LQH-----------TPEG--RLELHLFKLPGLPDTVFEVAEMESLKLEMVNEALIPPLVSKLVRL 472

  Fly   209 RNLALNENSLTSLPESLQNCS------QLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAV 267
            ..|     ||.:....:|:.|      .|::|.::.:.:.|||..|:.||:|..|:|        
 Frog   473 EEL-----SLINCTAKVQHASLAYLRDHLRILQVKFDDIKEIPLWIFSLRALEELHL-------- 524

  Fly   268 ADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 332
                                      .|.|                           :.||..|.
 Frog   525 --------------------------FGWL---------------------------SQDLSKNP 536

  Fly   333 LLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKS-MDEFNVEGNGITQLPDGMLASLSGLTTI 396
            .|   :|:..||||..|.::.| ||.:|||:.:... :.:|::..:|.      .|.:|:.|..:
 Frog   537 AL---ESLRELKSLKVLTIKSN-LSKIPATVADVAGHLQKFSIHNDGT------KLLTLNALKRL 591

  Fly   397 TLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALP--LDIG 459
            .|                  |..:.|....:::||:.:|| ...|..|::|||.|..:.  :.:.
 Frog   592 AL------------------VKELELVRCELERIPHAVFS-LTNLQVLDLKENTLHTIEEIISLQ 637

  Fly   460 TWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLP 524
            ....:..|.|..|.:..:|:.|..|:.||.|.|:.|.:..||:.:....|||.|||..|.|..||
 Frog   638 HCRKLSVLRLWHNQIAYIPEHIRKLKGLEELSLNRNKILVIPSQLFLCNKLRHLDLSNNEIRELP 702

  Fly   525 HEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPG 589
            .|||:|..||.|.|..|.:..||..:.....|..|.:.:|.|..|..::|||..|..|.:..| .
 Frog   703 PEIGVLQLLQYLGLSGNFLEDLPNELFFCQKLKTLKLGQNRLGNLSPKVGSLVCLVKLELKGN-R 766

  Fly   590 LEKLPFELALCQNLKY--LNIDKCPLSTIPPEIQ 621
            ::.||.||..|.:||.  |.::.....|:|.|::
 Frog   767 MDTLPPELGNCVSLKRSGLTVEPSLFETLPVEVR 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380 7/20 (35%)
LRR 185..535 CDD:443914 87/358 (24%)
leucine-rich repeat 185..207 CDD:275380 5/21 (24%)
leucine-rich repeat 208..230 CDD:275380 6/27 (22%)
leucine-rich repeat 231..253 CDD:275380 7/21 (33%)
leucine-rich repeat 254..276 CDD:275380 3/21 (14%)
leucine-rich repeat 277..299 CDD:275380 2/21 (10%)
leucine-rich repeat 300..322 CDD:275380 0/21 (0%)
leucine-rich repeat 323..345 CDD:275380 6/21 (29%)
leucine-rich repeat 346..368 CDD:275380 8/21 (38%)
leucine-rich repeat 369..392 CDD:275380 4/22 (18%)
leucine-rich repeat 417..440 CDD:275380 6/22 (27%)
leucine-rich repeat 441..486 CDD:275380 12/46 (26%)
PPP1R42 472..617 CDD:455733 52/146 (36%)
leucine-rich repeat 487..507 CDD:275380 7/19 (37%)
leucine-rich repeat 510..532 CDD:275380 13/21 (62%)
leucine-rich repeat 556..578 CDD:275380 8/21 (38%)
leucine-rich repeat 603..626 CDD:275380 6/21 (29%)
lrrc8eNP_001007863.1 Pannexin_like 1..341 CDD:463622
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..103
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..213
leucine-rich repeat 472..495 CDD:275380 6/27 (22%)
leucine-rich repeat 496..518 CDD:275380 7/21 (33%)
LRR 518..>782 CDD:443914 90/354 (25%)
leucine-rich repeat 519..546 CDD:275380 11/90 (12%)
LRR 1 544..566 11/22 (50%)
leucine-rich repeat 547..569 CDD:275380 8/22 (36%)
LRR 2 569..589 4/25 (16%)
leucine-rich repeat 570..593 CDD:275380 5/28 (18%)
LRR 3 593..614 7/39 (18%)
leucine-rich repeat 594..616 CDD:275380 6/22 (27%)
LRR 4 616..637 6/20 (30%)
leucine-rich repeat 617..641 CDD:275380 6/23 (26%)
LRR 5 641..662 5/20 (25%)
leucine-rich repeat 642..664 CDD:275380 6/21 (29%)
LRR 6 664..685 7/20 (35%)
leucine-rich repeat 665..687 CDD:275380 7/21 (33%)
LRR 7 687..708 13/20 (65%)
leucine-rich repeat 688..710 CDD:275380 13/21 (62%)
LRR 8 710..731 7/20 (35%)
leucine-rich repeat 711..733 CDD:275380 7/21 (33%)
LRR 9 733..754 6/20 (30%)
leucine-rich repeat 734..756 CDD:275380 8/21 (38%)
LRR 10 756..777 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.

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