DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur-8 and scrib

DIOPT Version :9

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:XP_021333089.1 Gene:scrib / 368473 ZFINID:ZDB-GENE-030616-572 Length:2047 Species:Danio rerio


Alignment Length:444 Identity:134/444 - (30%)
Similarity:215/444 - (48%) Gaps:52/444 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 LQRCRDEGIKRLDLSKSSITVIPSTV-KECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENS 217
            |.|| :..::.:|....|:|.:|..: :....|.||.|.:|::.:||.....|.:||.|.|::|.
Zfish     7 LWRC-NRHVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHNLRKLGLSDNE 70

  Fly   218 LTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSL 282
            :..||..:.|.:||..||:..|.::|||..|...:||.......|.:|.:.|...||..|..|||
Zfish    71 IQKLPPDVANFTQLVELDISRNDISEIPENIKFCQSLEIADFSGNPLTRLPDGFTQLRGLAHLSL 135

  Fly   283 RENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLV 347
            .:..::.|.:.||.|.||.||::..|.|:.||..:...|.|..|||..|.|..:||::|.|.:|.
Zfish   136 NDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNVLEVLPDTLGALPNLR 200

  Fly   348 RLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPA 412
            .|.:..|:|||:|..|.|.:.:...:|..|.:::||    ..:|||.                  
Zfish   201 ELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELP----TEISGLI------------------ 243

  Fly   413 QFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKL 477
                                       .||.|.:.||:|..||..||:...:..|.:..|.|..|
Zfish   244 ---------------------------ALTDLLLSENLLEILPDSIGSLKKLSILKVNQNRLVHL 281

  Fly   478 PDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQ 542
            .|.|...:||..|:|:.|:|:.:|.::|.|:||..|:::.||:..:|.|:|....|..|.|:.|:
Zfish   282 TDSIGECENLTELMLTENLLQSLPRSLGKLKKLTNLNVDRNRLSSVPAELGGCVSLNVLSLRDNR 346

  Fly   543 ITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFE 596
            :..||..:.:...|..|.|:.|.||.||..:.:| :|:.:::.:|.....|.|:
Zfish   347 LGKLPPELANATELHVLDVAGNRLQNLPFALANL-NLKAMWLAENQSQPMLKFQ 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380 4/21 (19%)
leucine-rich repeat 185..207 CDD:275380 8/21 (38%)
LRR_RI 204..401 CDD:238064 68/196 (35%)
LRR_8 207..264 CDD:290566 20/56 (36%)
leucine-rich repeat 208..230 CDD:275380 8/21 (38%)
leucine-rich repeat 231..253 CDD:275380 8/21 (38%)
LRR_8 252..310 CDD:290566 20/57 (35%)
leucine-rich repeat 254..276 CDD:275380 6/21 (29%)
leucine-rich repeat 277..299 CDD:275380 8/21 (38%)
LRR_8 299..356 CDD:290566 22/56 (39%)
leucine-rich repeat 300..322 CDD:275380 7/21 (33%)
leucine-rich repeat 323..345 CDD:275380 10/21 (48%)
LRR_8 344..403 CDD:290566 16/58 (28%)
leucine-rich repeat 346..368 CDD:275380 9/21 (43%)
leucine-rich repeat 369..392 CDD:275380 4/22 (18%)
LRR_RI <379..566 CDD:238064 48/186 (26%)
leucine-rich repeat 417..440 CDD:275380 0/22 (0%)
leucine-rich repeat 441..486 CDD:275380 16/44 (36%)
LRR_8 463..520 CDD:290566 19/56 (34%)
leucine-rich repeat 487..507 CDD:275380 7/19 (37%)
leucine-rich repeat 510..532 CDD:275380 7/21 (33%)
LRR_8 532..588 CDD:290566 16/55 (29%)
leucine-rich repeat 556..578 CDD:275380 9/21 (43%)
leucine-rich repeat 603..626 CDD:275380
scribXP_021333089.1 leucine-rich repeat 14..37 CDD:275380 4/22 (18%)
LRR <37..306 CDD:227223 97/317 (31%)
leucine-rich repeat 38..60 CDD:275380 8/21 (38%)
leucine-rich repeat 61..83 CDD:275380 8/21 (38%)
leucine-rich repeat 84..106 CDD:275380 8/21 (38%)
leucine-rich repeat 107..129 CDD:275380 6/21 (29%)
leucine-rich repeat 130..152 CDD:275380 8/21 (38%)
leucine-rich repeat 153..175 CDD:275380 7/21 (33%)
leucine-rich repeat 176..198 CDD:275380 10/21 (48%)
LRR <192..458 CDD:227223 70/258 (27%)
leucine-rich repeat 199..221 CDD:275380 9/21 (43%)
leucine-rich repeat 222..248 CDD:275380 9/74 (12%)
leucine-rich repeat 268..290 CDD:275380 6/21 (29%)
leucine-rich repeat 291..313 CDD:275380 8/21 (38%)
leucine-rich repeat 314..336 CDD:275380 7/21 (33%)
leucine-rich repeat 360..380 CDD:275380 8/19 (42%)
PDZ_signaling 739..816 CDD:238492
PDZ_signaling 875..952 CDD:238492
PDZ_signaling 1004..1092 CDD:238492
PDZ_signaling 1102..1191 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 70 1.000 Domainoid score I9532
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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