DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sur-8 and Lap1

DIOPT Version :10

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_611007.1 Gene:Lap1 / 36670 FlyBaseID:FBgn0033984 Length:849 Species:Drosophila melanogaster


Alignment Length:461 Identity:133/461 - (28%)
Similarity:223/461 - (48%) Gaps:64/461 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 LQRC-------RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNL 211
            |.:|       |:|.|.:||.|.:.:|..|...:....|.||||.:.::..|||::.....||.|
  Fly     4 LSKCFPCFKFKREEVIDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVL 68

  Fly   212 ALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVN 276
            .:|.|:|.|:|:::.:..||:.|||..|.:..:|..|...:.||.|.|..|.:..:.|.:..|::
  Fly    69 HVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLIS 133

  Fly   277 LTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIG 341
            |..|.|.|..:..|.:..|.||||..|::..|:|..||:.:...:||..||:..||..::|:.:|
  Fly   134 LQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVG 198

  Fly   342 NLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASY 406
            .||||..|.:.:|::..|.|.:...:.:..|...||.:..||..:                    
  Fly   199 ELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSEL-------------------- 243

  Fly   407 PTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLAT 471
                                         |..:.:..|::..|.|.|.|..:|...::|.....:
  Fly   244 -----------------------------SNWRNVEVLSICSNSLEAFPFSVGMLKSLVTFKCES 279

  Fly   472 NALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRL 536
            |.|.:|||.|..|:.||.|:||:|.|.::|:|||.||.||.|..::|::..||.|:....:|..|
  Fly   280 NGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVL 344

  Fly   537 ILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 601
            .:..||::.||::||:|..:..|:|..|.:..||..:.:|.:|.:::::.|.....:|       
  Fly   345 SVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTSMWLSDNQSQPLVP------- 402

  Fly   602 NLKYLN 607
             |:||:
  Fly   403 -LQYLD 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380 5/20 (25%)
LRR 185..535 CDD:443914 103/349 (30%)
leucine-rich repeat 185..207 CDD:275380 8/21 (38%)
leucine-rich repeat 208..230 CDD:275380 8/21 (38%)
leucine-rich repeat 231..253 CDD:275380 7/21 (33%)
leucine-rich repeat 254..276 CDD:275380 7/21 (33%)
leucine-rich repeat 277..299 CDD:275380 7/21 (33%)
leucine-rich repeat 300..322 CDD:275380 6/21 (29%)
leucine-rich repeat 323..345 CDD:275380 8/21 (38%)
leucine-rich repeat 346..368 CDD:275380 5/21 (24%)
leucine-rich repeat 369..392 CDD:275380 5/22 (23%)
leucine-rich repeat 417..440 CDD:275380 1/22 (5%)
leucine-rich repeat 441..486 CDD:275380 14/44 (32%)
PPP1R42 472..617 CDD:455733 48/136 (35%)
leucine-rich repeat 487..507 CDD:275380 11/19 (58%)
leucine-rich repeat 510..532 CDD:275380 7/21 (33%)
leucine-rich repeat 556..578 CDD:275380 6/21 (29%)
leucine-rich repeat 603..626 CDD:275380 3/5 (60%)
Lap1NP_611007.1 LRR 12..407 CDD:443914 130/451 (29%)
leucine-rich repeat 21..41 CDD:275380 5/19 (26%)
leucine-rich repeat 42..64 CDD:275380 8/21 (38%)
leucine-rich repeat 65..87 CDD:275380 8/21 (38%)
leucine-rich repeat 88..110 CDD:275380 7/21 (33%)
leucine-rich repeat 111..133 CDD:275380 7/21 (33%)
leucine-rich repeat 134..156 CDD:275380 7/21 (33%)
leucine-rich repeat 157..179 CDD:275380 6/21 (29%)
leucine-rich repeat 180..202 CDD:275380 8/21 (38%)
leucine-rich repeat 203..225 CDD:275380 5/21 (24%)
leucine-rich repeat 226..248 CDD:275380 6/70 (9%)
leucine-rich repeat 272..294 CDD:275380 8/21 (38%)
leucine-rich repeat 295..317 CDD:275380 12/21 (57%)
leucine-rich repeat 318..340 CDD:275380 7/21 (33%)
leucine-rich repeat 364..386 CDD:275380 6/21 (29%)
PDZ_canonical 778..846 CDD:467153
Blue background indicates that the domain is not in the aligned region.

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