DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur-8 and LRRC30

DIOPT Version :9

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_001099051.1 Gene:LRRC30 / 339291 HGNCID:30219 Length:301 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380
leucine-rich repeat 185..207 CDD:275380
LRR_RI 204..401 CDD:238064
LRR_8 207..264 CDD:290566
leucine-rich repeat 208..230 CDD:275380
leucine-rich repeat 231..253 CDD:275380
LRR_8 252..310 CDD:290566
leucine-rich repeat 254..276 CDD:275380
leucine-rich repeat 277..299 CDD:275380
LRR_8 299..356 CDD:290566
leucine-rich repeat 300..322 CDD:275380
leucine-rich repeat 323..345 CDD:275380
LRR_8 344..403 CDD:290566
leucine-rich repeat 346..368 CDD:275380
leucine-rich repeat 369..392 CDD:275380
LRR_RI <379..566 CDD:238064
leucine-rich repeat 417..440 CDD:275380
leucine-rich repeat 441..486 CDD:275380
LRR_8 463..520 CDD:290566
leucine-rich repeat 487..507 CDD:275380
leucine-rich repeat 510..532 CDD:275380
LRR_8 532..588 CDD:290566
leucine-rich repeat 556..578 CDD:275380
leucine-rich repeat 603..626 CDD:275380
LRRC30NP_001099051.1 LRR 1 72..93
leucine-rich repeat 73..95 CDD:275380
LRR_8 94..173 CDD:290566
LRR 2 95..116
leucine-rich repeat 96..118 CDD:275380
LRR 3 118..139
leucine-rich repeat 119..141 CDD:275380
LRR_4 141..179 CDD:289563
LRR 4 141..163
leucine-rich repeat 142..164 CDD:275380
LRR 5 164..185
leucine-rich repeat 165..187 CDD:275380
LRR 6 187..208
leucine-rich repeat 188..210 CDD:275380
LRR 7 210..231
leucine-rich repeat 211..229 CDD:275380
LRR 8 233..254
leucine-rich repeat 257..277 CDD:275378
LRR 9 265..287
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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