DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sur-8 and lron-15

DIOPT Version :9

Sequence 1:NP_001262665.1 Gene:Sur-8 / 42093 FlyBaseID:FBgn0038504 Length:694 Species:Drosophila melanogaster
Sequence 2:NP_495322.3 Gene:lron-15 / 174079 WormBaseID:WBGene00016974 Length:1275 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sur-8NP_001262665.1 leucine-rich repeat 163..184 CDD:275380
leucine-rich repeat 185..207 CDD:275380
LRR_RI 204..401 CDD:238064
LRR_8 207..264 CDD:290566
leucine-rich repeat 208..230 CDD:275380
leucine-rich repeat 231..253 CDD:275380
LRR_8 252..310 CDD:290566
leucine-rich repeat 254..276 CDD:275380
leucine-rich repeat 277..299 CDD:275380
LRR_8 299..356 CDD:290566
leucine-rich repeat 300..322 CDD:275380
leucine-rich repeat 323..345 CDD:275380
LRR_8 344..403 CDD:290566
leucine-rich repeat 346..368 CDD:275380
leucine-rich repeat 369..392 CDD:275380
LRR_RI <379..566 CDD:238064
leucine-rich repeat 417..440 CDD:275380
leucine-rich repeat 441..486 CDD:275380
LRR_8 463..520 CDD:290566
leucine-rich repeat 487..507 CDD:275380
leucine-rich repeat 510..532 CDD:275380
LRR_8 532..588 CDD:290566
leucine-rich repeat 556..578 CDD:275380
leucine-rich repeat 603..626 CDD:275380
lron-15NP_495322.3 LRR_8 95..155 CDD:290566
leucine-rich repeat 120..144 CDD:275380
LRR_RI <144..348 CDD:238064
LRR_8 144..205 CDD:290566
leucine-rich repeat 145..168 CDD:275380
leucine-rich repeat 169..194 CDD:275380
leucine-rich repeat 195..217 CDD:275380
LRR_8 217..274 CDD:290566
leucine-rich repeat 218..239 CDD:275380
leucine-rich repeat 240..263 CDD:275380
leucine-rich repeat 264..311 CDD:275380
LRR_8 289..346 CDD:290566
leucine-rich repeat 312..335 CDD:275380
leucine-rich repeat 336..356 CDD:275380
LRR_RI <338..498 CDD:238064
leucine-rich repeat 361..383 CDD:275380
leucine-rich repeat 384..405 CDD:275380
LRR_8 408..473 CDD:290566
leucine-rich repeat 409..432 CDD:275380
leucine-rich repeat 433..462 CDD:275380
LRR_8 461..522 CDD:290566
leucine-rich repeat 463..487 CDD:275380
leucine-rich repeat 488..511 CDD:275380
LRR_8 510..568 CDD:290566
LRR_4 510..551 CDD:289563
leucine-rich repeat 512..533 CDD:275380
LRR_4 533..573 CDD:289563
leucine-rich repeat 534..557 CDD:275380
leucine-rich repeat 558..581 CDD:275380
LRR_8 583..642 CDD:290566
leucine-rich repeat 584..607 CDD:275380
LRR_RI <607..799 CDD:238064
leucine-rich repeat 608..631 CDD:275380
LRR_8 630..688 CDD:290566
leucine-rich repeat 632..655 CDD:275380
leucine-rich repeat 656..676 CDD:275380
leucine-rich repeat 680..703 CDD:275380
leucine-rich repeat 704..749 CDD:275380
leucine-rich repeat 726..739 CDD:275378
LRR_8 748..808 CDD:290566
leucine-rich repeat 750..771 CDD:275380
leucine-rich repeat 774..797 CDD:275380
LRR_8 797..856 CDD:290566
LRR_RI <798..982 CDD:238064
leucine-rich repeat 798..845 CDD:275380
LRR_8 845..904 CDD:290566
leucine-rich repeat 846..869 CDD:275380
leucine-rich repeat 870..893 CDD:275380
leucine-rich repeat 894..915 CDD:275380
LRR_8 938..998 CDD:290566
leucine-rich repeat 940..963 CDD:275380
leucine-rich repeat 964..987 CDD:275380
leucine-rich repeat 988..1009 CDD:275380
leucine-rich repeat 1038..1064 CDD:275380
leucine-rich repeat 1113..1139 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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