DRSC/TRiP Functional Genomics Resources

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Protein Alignment sds22 and Cep97

DIOPT Version :9

Sequence 1:NP_650619.1 Gene:sds22 / 42091 FlyBaseID:FBgn0028992 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_083091.1 Gene:Cep97 / 74201 MGIID:1921451 Length:856 Species:Mus musculus


Alignment Length:160 Identity:52/160 - (32%)
Similarity:84/160 - (52%) Gaps:2/160 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 IERLFLRWNLIKKIENLSSLKTLIELELYDNQITKIENLDDLPHLEVLDISFNRLTKIENLDKLV 127
            :..|.|..|.|.|:|||...|.||:|.:.:|::.::..:..|..|.||::..|.:..:|.|..||
Mouse    38 VHTLILDKNQIIKLENLEKCKQLIQLSVANNRLVRMMGVAKLTQLRVLNLPHNSIGCVEGLKDLV 102

  Fly   128 KLEKVYFVSNRITQIENLDMLTNLTMLELGDNKLKKIENIEMLVNLRQLFLGKNKIAKIENLDTL 192
            .||.:....|.:..:|.::..|.|..|:|.||.:.:|.::..|::|:.|.|..|.|..:......
Mouse   103 HLEWLNLAGNNLKTMEQVNSCTALQHLDLSDNNIPQIGDVSKLISLKTLLLHGNIITSLRMAPAY 167

  Fly   193 V--NLEILSLQANRIVKIENLEKLANLREL 220
            :  ||.||||..|.|..:..:..||:|.||
Mouse   168 LPRNLSILSLAENEIRDLNEISFLASLSEL 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sds22NP_650619.1 leucine-rich repeat 43..62 CDD:275380
LRR_8 61..117 CDD:290566 18/53 (34%)
leucine-rich repeat 63..84 CDD:275380 8/20 (40%)
LRR_4 83..125 CDD:289563 12/41 (29%)
leucine-rich repeat 85..106 CDD:275380 5/20 (25%)
LRR_8 105..183 CDD:290566 24/77 (31%)
leucine-rich repeat 107..128 CDD:275380 7/20 (35%)
LRR_4 128..168 CDD:289563 11/39 (28%)
leucine-rich repeat 129..150 CDD:275380 4/20 (20%)
LRR_4 149..189 CDD:289563 13/39 (33%)
leucine-rich repeat 151..172 CDD:275380 7/20 (35%)
leucine-rich repeat 173..194 CDD:275380 5/22 (23%)
LRR_8 194..249 CDD:290566 13/27 (48%)
LRR_4 194..235 CDD:289563 13/27 (48%)
leucine-rich repeat 195..216 CDD:275380 8/20 (40%)
leucine-rich repeat 217..238 CDD:275380 3/4 (75%)
Cep97NP_083091.1 leucine-rich repeat 17..37 CDD:275380
LRR 1 37..58 8/19 (42%)
leucine-rich repeat 38..59 CDD:275380 8/20 (40%)
LRR_4 58..99 CDD:289563 11/40 (28%)
LRR 2 59..80 4/20 (20%)
leucine-rich repeat 60..81 CDD:275380 5/20 (25%)
LRR_8 80..136 CDD:290566 18/55 (33%)
LRR_4 80..122 CDD:289563 12/41 (29%)
LRR 3 81..102 6/20 (30%)
leucine-rich repeat 82..103 CDD:275380 7/20 (35%)
LRR_4 103..144 CDD:289563 11/40 (28%)
LRR 4 103..124 4/20 (20%)
leucine-rich repeat 104..125 CDD:275380 4/20 (20%)
LRR 5 125..146 6/20 (30%)
leucine-rich repeat 126..147 CDD:275380 7/20 (35%)
LRR_8 147..206 CDD:290566 18/51 (35%)
LRR 6 147..168 5/20 (25%)
leucine-rich repeat 148..171 CDD:275380 5/22 (23%)
LRR 7 171..192 8/20 (40%)
leucine-rich repeat 172..196 CDD:275380 10/23 (43%)
LRR 8 196..205 2/2 (100%)
CCP110-binding. /evidence=ECO:0000250 300..742
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 430..451
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..525
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 646..672
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 737..840
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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