DRSC/TRiP Functional Genomics Resources

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Protein Alignment sds22 and dnal1

DIOPT Version :9

Sequence 1:NP_650619.1 Gene:sds22 / 42091 FlyBaseID:FBgn0028992 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_012823845.1 Gene:dnal1 / 549066 XenbaseID:XB-GENE-983792 Length:201 Species:Xenopus tropicalis


Alignment Length:163 Identity:49/163 - (30%)
Similarity:81/163 - (49%) Gaps:28/163 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 LKKIE-NIEMLVNLRQLFLGKNKIAKIENLDTLVNLEILSLQANRIVKIENLEKLA-NLRELYVS 223
            ::|:: ::..|||..:|.|..|.|.||.||:.|..|.||||..|.|..:..||.:. .|.||::|
 Frog    46 IEKMDASLSTLVNCEKLSLSTNCIEKIANLNGLKFLRILSLGRNNIKNLNGLEAVGETLEELWIS 110

  Fly   224 ENGVETIENLSENTKLETLDLAKNRLKGIANLEKLELLEELWLNHNGVDDWKDIELLKVNKALQT 288
            .|.:|                   :||||..::||::   |::::|.|.||.:...|.....|:.
 Frog   111 YNLIE-------------------KLKGIHVMKKLKV---LYMSNNLVKDWAEFSKLGELPLLED 153

  Fly   289 IYLEYNPLAK----DVRYRSKLRDILPQLQKID 317
            :....|||.:    :..:..:....||:|:|:|
 Frog   154 MVFVGNPLEERHTAEGNWLEEAVKRLPKLKKLD 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sds22NP_650619.1 leucine-rich repeat 43..62 CDD:275380
LRR_8 61..117 CDD:290566
leucine-rich repeat 63..84 CDD:275380
LRR_4 83..125 CDD:289563
leucine-rich repeat 85..106 CDD:275380
LRR_8 105..183 CDD:290566 7/22 (32%)
leucine-rich repeat 107..128 CDD:275380
LRR_4 128..168 CDD:289563 1/7 (14%)
leucine-rich repeat 129..150 CDD:275380
LRR_4 149..189 CDD:289563 10/28 (36%)
leucine-rich repeat 151..172 CDD:275380 2/11 (18%)
leucine-rich repeat 173..194 CDD:275380 9/20 (45%)
LRR_8 194..249 CDD:290566 15/55 (27%)
LRR_4 194..235 CDD:289563 15/41 (37%)
leucine-rich repeat 195..216 CDD:275380 9/21 (43%)
leucine-rich repeat 217..238 CDD:275380 6/20 (30%)
dnal1XP_012823845.1 internalin_A 53..>163 CDD:380193 43/131 (33%)
leucine-rich repeat 59..80 CDD:275378 9/20 (45%)
leucine-rich repeat 81..99 CDD:275378 8/17 (47%)
leucine-rich repeat 104..125 CDD:275382 10/39 (26%)
leucine-rich repeat 126..149 CDD:275382 7/25 (28%)
leucine-rich repeat 151..181 CDD:275382 5/29 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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