DRSC/TRiP Functional Genomics Resources

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Protein Alignment sds22 and dtr

DIOPT Version :9

Sequence 1:NP_650619.1 Gene:sds22 / 42091 FlyBaseID:FBgn0028992 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_724335.2 Gene:dtr / 318856 FlyBaseID:FBgn0023090 Length:1483 Species:Drosophila melanogaster


Alignment Length:221 Identity:65/221 - (29%)
Similarity:104/221 - (47%) Gaps:44/221 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 NRLTKIENLDKLVKLEKVYFVSNRITQ-----------IENLDMLTNLTMLELGDNKLKKIENIE 168
            ||:|. :.|.:|.|.:|:| .:.|:..           ||:|:..|.|..|.|..|.:.:|:.:|
  Fly    13 NRMTP-KGLKELCKKDKLY-QTPRLNDVLYLHYQGFQCIESLEEYTELKCLWLECNAISEIQGLE 75

  Fly   169 MLVNLRQLFLGKNKIAKIENLDTLVNLEILSLQANRIVKIENL--EKLANLRELYVSENGVETIE 231
            .|..|:.|||..|.|.||||||....|:.|:|.:|.|.||:|:  ..|..|..|.:|.|.::..|
  Fly    76 KLSKLKCLFLQNNLITKIENLDPCRELDTLNLSSNHIRKIQNIGTNVLPVLNTLTISSNYLKDSE 140

  Fly   232 NLSENTKLETLDLAKNRLKGIANLEKLELLEELWLNHNGVDDWKDIELLKVNKALQTIYLEYNPL 296
            :||:..:.:||.:                   |.|::|.:||...:::.:....|:.:.|:.||:
  Fly   141 SLSDLIQCKTLSV-------------------LDLSNNRIDDILIVKIFEQMLNLKVLVLQGNPV 186

  Fly   297 AKDVRYRSKLRDILPQLQKIDATLCK 322
            ...          |||.:|.....||
  Fly   187 VSR----------LPQYRKTLILACK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sds22NP_650619.1 leucine-rich repeat 43..62 CDD:275380
LRR_8 61..117 CDD:290566 1/1 (100%)
leucine-rich repeat 63..84 CDD:275380
LRR_4 83..125 CDD:289563 4/9 (44%)
leucine-rich repeat 85..106 CDD:275380
LRR_8 105..183 CDD:290566 25/78 (32%)
leucine-rich repeat 107..128 CDD:275380 5/12 (42%)
LRR_4 128..168 CDD:289563 13/50 (26%)
leucine-rich repeat 129..150 CDD:275380 6/31 (19%)
LRR_4 149..189 CDD:289563 17/39 (44%)
leucine-rich repeat 151..172 CDD:275380 7/20 (35%)
leucine-rich repeat 173..194 CDD:275380 12/20 (60%)
LRR_8 194..249 CDD:290566 18/56 (32%)
LRR_4 194..235 CDD:289563 15/42 (36%)
leucine-rich repeat 195..216 CDD:275380 9/22 (41%)
leucine-rich repeat 217..238 CDD:275380 7/20 (35%)
dtrNP_724335.2 leucine-rich repeat 38..57 CDD:275380 3/18 (17%)
LRR_8 56..112 CDD:290566 24/55 (44%)
LRR_4 56..98 CDD:289563 19/41 (46%)
LRR_RI 58..>184 CDD:238064 44/144 (31%)
leucine-rich repeat 58..79 CDD:275380 7/20 (35%)
leucine-rich repeat 80..101 CDD:275380 12/20 (60%)
LRR_8 100..161 CDD:290566 21/79 (27%)
leucine-rich repeat 102..125 CDD:275380 9/22 (41%)
leucine-rich repeat 126..147 CDD:275380 7/20 (35%)
leucine-rich repeat 151..175 CDD:275380 6/42 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447154
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45973
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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