DRSC/TRiP Functional Genomics Resources

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Protein Alignment lute and Abtb2

DIOPT Version :9

Sequence 1:NP_001262663.1 Gene:lute / 42089 FlyBaseID:FBgn0262871 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_849221.2 Gene:Abtb2 / 99382 MGIID:2139365 Length:1024 Species:Mus musculus


Alignment Length:144 Identity:41/144 - (28%)
Similarity:64/144 - (44%) Gaps:23/144 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 NNELMSDVKFIVGGEFDIDPIQTIPAHKYILATGSSVFYAMFYGGLAENKQE--------IKVPD 263
            ||:.||||.|:|.|:.       ..|||.:|.|.|:.|..     |..||.|        |::.|
Mouse   839 NNKEMSDVTFLVEGKL-------FYAHKVLLVTASNRFKT-----LMTNKSEQDGDSSKTIEISD 891

  Fly   264 VEPTAFLTLLRYLY---CDEIKLEPEHILATLYAAKKYIVPHLARACVNYLEVKLTAKNACLLLS 325
            ::...|..|::|||   .:.:::....||..|.||..:.:..|.|.|.......|:.::|.....
Mouse   892 IKYHIFQMLMQYLYYGGTESMEIPTADILQLLSAANLFQLDALQRHCEILCSQTLSVESAVNTYK 956

  Fly   326 QSRLFEEPELMQRC 339
            .:::...|||...|
Mouse   957 YAKIHNAPELALFC 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
luteNP_001262663.1 BTB 204..311 CDD:279045 35/114 (31%)
BTB 213..315 CDD:197585 31/112 (28%)
BACK 321..427 CDD:197943 4/19 (21%)
PHR 472..615 CDD:285277
Abtb2NP_849221.2 H2A 194..>242 CDD:305064
Ank_4 <498..542 CDD:290365
ANK 516..670 CDD:238125
ANK 1 521..550
ANK repeat 524..565 CDD:293786
Ank_2 526..633 CDD:289560
ANK repeat 567..604 CDD:293786
ANK 2 567..596
ANK 3 606..635
ANK repeat 606..631 CDD:293786
Ank_2 611..>679 CDD:289560
ANK repeat 649..679 CDD:293786
ANK 4 649..678
BTB 836..939 CDD:279045 34/111 (31%)
BTB 845..946 CDD:197585 31/112 (28%)
SPOP_C_like 946..>990 CDD:269810 6/25 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833900
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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