DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lute and btbd2a

DIOPT Version :9

Sequence 1:NP_001262663.1 Gene:lute / 42089 FlyBaseID:FBgn0262871 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_001038557.1 Gene:btbd2a / 565970 ZFINID:ZDB-GENE-030829-3 Length:595 Species:Danio rerio


Alignment Length:625 Identity:249/625 - (39%)
Similarity:347/625 - (55%) Gaps:80/625 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SLKSAGKRNQESMSHSQPNGGWINVETLNNGNGLLHSPPHNHQQQQQQQQRGGGGAS-------- 81
            |..:||:.|..|           :...|:|...|.::||.|.........||.|||:        
Zfish    17 SKMAAGESNSRS-----------SCLNLSNSGPLGNAPPSNSAHSSPASNRGAGGAAGGINRSAG 70

  Fly    82 -------PAGGGGGPSAAADHNIQITQPISAPSSPLASPGALNSSGSSSGGG------AGSAGGI 133
                   |..|||..||..          |.||:.......:..||:|||..      :.|:...
Zfish    71 NSNPQSGPENGGGTESAVR----------STPSAHNPPRQTVGQSGASSGAASNMTATSSSSSSS 125

  Fly   134 SGSPTAFCLPSSSAAAAVAAISATPTSGSGSYVCSAGTNWHFAAVAASNAIDTADP--NWQASKA 196
            |.|.:|....||:.|:|.||:|:.|:|                   .::.:...:|  ||||:|:
Zfish   126 SSSSSASTASSSADASAAAAVSSLPSS-------------------PASVLVYREPVYNWQATKS 171

  Fly   197 TVLERNAAMFNNELMSDVKFIVGGEFDIDPIQTIPAHKYILATGSSVFYAMFYGGLAENKQEIKV 261
            ||.||.|.:||||::|||.|:||....   :|.||||::.||.||:||.|||.||:|....||::
Zfish   172 TVKERFAFLFNNEVLSDVHFLVGKGMG---VQRIPAHRFALAVGSAVFDAMFNGGMATTSTEIEL 233

  Fly   262 PDVEPTAFLTLLRYLYCDEIKLEPEHILATLYAAKKYIVPHLARACVNYLEVKLTAKNACLLLSQ 326
            |||||.|||.||::||.||:::.||.::.|||.||||.||.|...||.:|:..|.|.||.:||:|
Zfish   234 PDVEPAAFLALLKFLYSDEVQIGPETVMTTLYTAKKYAVPALEAHCVEFLKKNLRADNAFMLLTQ 298

  Fly   327 SRLFEEPELMQRCWEVIDAQAEMAVKSEDFVDIDLKTFESILSRETLNCKEIHLFEAALNWAMNA 391
            :|||:||:|...|.|.||.....|:.:|.|.|:||.|..::|.|:||..:|:.||.||:.||...
Zfish   299 ARLFDEPQLASLCLENIDKNTADALAAEGFTDVDLDTLVAVLERDTLGVREVRLFGAAVRWAEAE 363

  Fly   392 CEKMSIDDTPQNKRRLLGQALHLIRIPTMSLEEFANGVAQTGILSSQETIDMFLHFTAKMKPSLG 456
            .::..:..||:||||:||:||.|||.|.|::||||.|.||:|||:.:|.:.:|||||...||.:.
Zfish   364 AQRQQLQPTPENKRRVLGKALALIRFPLMTIEEFAAGPAQSGILTDREVVSLFLHFTVNPKPHVE 428

  Fly   457 FPTRSRAGLKTQVCH--RFQSCAYRSNQWRYRGRCDSIQFSVDRRIFIVGFGLYGSSTGAANYNV 519
            |..|.|..|:.:.|.  ||...   .::|.|.|..|.|:|||:||||:.|||||||..|..:|.|
Zfish   429 FIDRPRCCLRGKECSITRFSQV---ESRWGYSGTSDRIRFSVNRRIFVGGFGLYGSIHGPTDYQV 490

  Fly   520 KIELKRL--GRTLAENDTKFFSDGSSNTFHVFFENPIQIEPECYYTASVILDGNELSFFGQEGMS 582
            .|::...  ...|.:|||.|..||:::||.|.|:.|::|.|...|.|...|.|.: |.:|.:||.
Zfish   491 NIQIIHTDSNTVLGQNDTGFSCDGTASTFRVMFKEPVEILPSVNYIACATLKGPD-SHYGTKGMR 554

  Fly   583 EV-----LMGNVT-FQFQCSSESTNGTGVQGGQIPELIFY 616
            :|     ..|..| |.|..::.:.|||.|:.|||||:|||
Zfish   555 KVTHEAPATGTKTCFTFCYAAGNNNGTSVEDGQIPEVIFY 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
luteNP_001262663.1 BTB 204..311 CDD:279045 57/106 (54%)
BTB 213..315 CDD:197585 53/101 (52%)
BACK 321..427 CDD:197943 49/105 (47%)
PHR 472..615 CDD:285277 61/150 (41%)
btbd2aNP_001038557.1 BTB 180..284 CDD:279045 57/106 (54%)
BTB 188..287 CDD:197585 53/101 (52%)
BACK 299..398 CDD:197943 45/98 (46%)
PHR 446..593 CDD:285277 61/150 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576631
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2075
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000758
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.