DRSC/TRiP Functional Genomics Resources

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Protein Alignment lute and abtb2a

DIOPT Version :9

Sequence 1:NP_001262663.1 Gene:lute / 42089 FlyBaseID:FBgn0262871 Length:735 Species:Drosophila melanogaster
Sequence 2:XP_687881.4 Gene:abtb2a / 559451 ZFINID:ZDB-GENE-100422-13 Length:1006 Species:Danio rerio


Alignment Length:201 Identity:50/201 - (24%)
Similarity:87/201 - (43%) Gaps:24/201 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 AAVAASNAIDTADPNWQASKAT-VLERNAAMFNNELMSDVKFIVGGEFDIDPIQTIPAHKYILAT 239
            |||.......||.|:..|.|.| ..:.:|...||..||||.|:|.|       :...||:.:|.:
Zfish   796 AAVFCHCVCSTAAPSILAVKDTPTAQLDAHFLNNSEMSDVIFVVEG-------RPFYAHRVLLMS 853

  Fly   240 GSSVF---YAMFYGGLAENKQEIKVPDVEPTAFLTLLRYLYC---DEIKLEPEHILATLYAAKKY 298
            .|..|   .:::......:...|::.|::...|..::.:|||   :.:.:....:|..|..|..:
Zfish   854 ASQRFRDLLSLYQSNGTSDHMAIEITDIKYNTFKMMMAHLYCGGAECLDVSASDLLKLLPVAHSF 918

  Fly   299 IVPHLARACVNYLEVKLTAKNACLLLSQSRLFEEPELMQRCWEVIDAQAEMAVKSEDFVD-IDLK 362
            .:|.|.|.|......::...||..:...:::.|..||:..|...|         .::.|| :|.:
Zfish   919 QLPVLKRHCEILCSERINLNNAVSIYRTAKVSEAVELVVFCEGFI---------LQNMVDLLDCE 974

  Fly   363 TFESIL 368
            .||.:|
Zfish   975 AFEELL 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
luteNP_001262663.1 BTB 204..311 CDD:279045 27/112 (24%)
BTB 213..315 CDD:197585 23/107 (21%)
BACK 321..427 CDD:197943 11/49 (22%)
PHR 472..615 CDD:285277
abtb2aXP_687881.4 H2A 187..>235 CDD:305064
ANK 505..655 CDD:238125
ANK repeat 513..554 CDD:293786
Ank_2 515..625 CDD:289560
ANK repeat 556..590 CDD:293786
ANK repeat 592..620 CDD:293786
Ank_4 598..655 CDD:290365
BTB 825..928 CDD:279045 26/109 (24%)
BTB 834..935 CDD:197585 23/107 (21%)
SPOP_C_like 935..986 CDD:269810 13/55 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576638
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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