DRSC/TRiP Functional Genomics Resources

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Protein Alignment lute and LOC555499

DIOPT Version :9

Sequence 1:NP_001262663.1 Gene:lute / 42089 FlyBaseID:FBgn0262871 Length:735 Species:Drosophila melanogaster
Sequence 2:XP_005168501.1 Gene:LOC555499 / 555499 -ID:- Length:564 Species:Danio rerio


Alignment Length:568 Identity:243/568 - (42%)
Similarity:332/568 - (58%) Gaps:71/568 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GGASPAGGGGGPSAAADHNIQITQPISAPSSPLASPGALNSSGSSSG----------------GG 126
            ||:  .|||||           :|.::..|:|...|.||.|.|.:||                |.
Zfish    38 GGS--VGGGGG-----------SQGVTRRSNPQPGPQALESPGVASGLPPNLMNAVPAAAAVVGP 89

  Fly   127 -AGSAGGISGSPTAFCLPSSSAAAAVAAISATPTSGSGSYVCSAGTNWHFAAVAASNAIDTADP- 189
             |.:|..::|||:...:  :.|||..:|:||.|                    ||:..:...:| 
Zfish    90 LAPAASNMTGSPSNAAM--TPAAATHSALSAPP--------------------AAAAVLVYREPV 132

  Fly   190 -NWQASKATVLERNAAMFNNELMSDVKFIVGGEFDIDPIQTIPAHKYILATGSSVFYAMFYGGLA 253
             ||||:|:||.||.|.:||||::|||.|:||....   :|.||||:::||.||:||.|||.||:|
Zfish   133 YNWQATKSTVKERFAFLFNNEVLSDVHFLVGKGMG---VQRIPAHRFVLAVGSAVFDAMFNGGMA 194

  Fly   254 ENKQEIKVPDVEPTAFLTLLRYLYCDEIKLEPEHILATLYAAKKYIVPHLARACVNYLEVKLTAK 318
            ....||::|||||.|||:||::||.||:.:.||.::.|||.||||.||.|...||.:|:..|.|.
Zfish   195 TTSTEIELPDVEPAAFLSLLKFLYSDEVHIGPETVMTTLYTAKKYAVPALEAHCVEFLKKNLRAD 259

  Fly   319 NACLLLSQSRLFEEPELMQRCWEVIDAQAEMAVKSEDFVDIDLKTFESILSRETLNCKEIHLFEA 383
            ||.:||:|:|||:||:|...|.|.||.....|:.:|.|.||||.|..::|.|:||..:|:|||.|
Zfish   260 NAFMLLTQARLFDEPQLASLCLENIDKNTGDALAAEGFTDIDLDTLVAVLERDTLGVREVHLFGA 324

  Fly   384 ALNWAMNACEKMSIDDTPQNKRRLLGQALHLIRIPTMSLEEFANGVAQTGILSSQETIDMFLHFT 448
            |:.||.....:..:..||:||||:||:||.|||.|.|::||||.|.||:.||:.:|.:.:|||||
Zfish   325 AVRWAEAEAHRQQLQPTPENKRRVLGKALSLIRFPLMTIEEFAAGPAQSAILTDREVVSLFLHFT 389

  Fly   449 AKMKPSLGFPTRSRAGLKTQVCH--RFQSCAYRSNQWRYRGRCDSIQFSVDRRIFIVGFGLYGSS 511
            ...||.:.|..|.|..|:.:.|.  ||...   .::|.|.|..|.|:|||.|||||||||||||.
Zfish   390 VNPKPRVEFIDRPRCCLRGKECSITRFGQV---ESRWGYSGTSDRIRFSVSRRIFIVGFGLYGSI 451

  Fly   512 TGAANYNVKIELKRL--GRTLAENDTKFFSDGSSNTFHVFFENPIQIEPECYYTASVILDGNELS 574
            .|..:|.|.|::...  ...|.:|||.|..|||:|||.|.|:.|:::.|...|||...|.|.: |
Zfish   452 HGPTDYQVNIQIIHTDSNTVLGQNDTGFSCDGSANTFRVMFKEPVEVLPNVNYTACATLKGPD-S 515

  Fly   575 FFGQEGMSEVL-----MGNVT-FQFQCSSESTNGTGVQGGQIPELIFY 616
            .:|.:||.:|.     .|..| |.|..::.:.|||.|:.|||||:|||
Zfish   516 HYGTKGMRKVTHESSGSGTKTCFTFCYAAGNNNGTSVEDGQIPEVIFY 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
luteNP_001262663.1 BTB 204..311 CDD:279045 57/106 (54%)
BTB 213..315 CDD:197585 53/101 (52%)
BACK 321..427 CDD:197943 51/105 (49%)
PHR 472..615 CDD:285277 65/150 (43%)
LOC555499XP_005168501.1 BTB 149..253 CDD:279045 57/106 (54%)
BTB 157..256 CDD:197585 53/101 (52%)
BACK 268..367 CDD:197943 47/98 (48%)
PHR 415..562 CDD:285277 65/150 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576629
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000758
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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