DRSC/TRiP Functional Genomics Resources

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Protein Alignment lute and Tdpoz2l4

DIOPT Version :10

Sequence 1:NP_001262663.1 Gene:lute / 42089 FlyBaseID:FBgn0262871 Length:735 Species:Drosophila melanogaster
Sequence 2:XP_003749379.1 Gene:Tdpoz2l4 / 502566 RGDID:1564313 Length:364 Species:Rattus norvegicus


Alignment Length:183 Identity:50/183 - (27%)
Similarity:75/183 - (40%) Gaps:24/183 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 MFNNELMSDVKFIVGGEFDIDPIQTIPAHKYILATGSSVFYAMFYGGLAEN-KQEIKVPDVEPTA 268
            ::.|.|.:|...:|.|       |...|||.|||..|.||.|||...:.|: ...|::.|:....
  Rat   181 LWENSLFTDCSLVVAG-------QEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQV 238

  Fly   269 FLTLLRYLYCDEIKLEPEHILAT--LYAAKKYIVPHLARACVNYLEVKLTAKNACLLLSQSRLFE 331
            |..::.::|..:......|.:||  |.||.||.:..|...|.:.|...|:.|||...|..:.|..
  Rat   239 FKEMMAFIYTGKAPHLHSHSMATGLLAAADKYDLQDLKVICEDSLCRNLSVKNAVPTLILADLHS 303

  Fly   332 EPELMQRCWEVIDAQAEMAVKSEDFVDIDLKTFESILSRETLNCKEIHLFEAA 384
            ...|           ..||:   ||:.:........|..:::.....||.|.|
  Rat   304 TEHL-----------KSMAM---DFIILHASEVSETLEWKSMVESHPHLVEEA 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
luteNP_001262663.1 BTB_POZ_BTBD3_6 205..315 CDD:349591 34/112 (30%)
BACK_BTBD3_like 315..409 CDD:350563 16/70 (23%)
PHR 471..616 CDD:462339
Tdpoz2l4XP_003749379.1 MATH 16..153 CDD:445786
BTB_POZ 165..292 CDD:453885 36/117 (31%)
BACK 287..351 CDD:475122 16/70 (23%)
Blue background indicates that the domain is not in the aligned region.

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