DRSC/TRiP Functional Genomics Resources

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Protein Alignment lute and Btbd2

DIOPT Version :9

Sequence 1:NP_001262663.1 Gene:lute / 42089 FlyBaseID:FBgn0262871 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_001366013.1 Gene:Btbd2 / 208198 MGIID:1933831 Length:514 Species:Mus musculus


Alignment Length:531 Identity:228/531 - (42%)
Similarity:315/531 - (59%) Gaps:48/531 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 ALNSSGSSS---GGGAGSAGGISGSPTAFCLPSSSAAAA-VAAISATPTSGSGSYVCSAGTNWHF 175
            |...||.:|   |.||| ||.:..|..|...||::||.| |.....:|..|.|:           
Mouse     2 AAGGSGRASCPPGVGAG-AGSLGPSANAAAAPSNAAACAPVPPPPPSPPPGPGT----------- 54

  Fly   176 AAVAASNAIDTADP---------NWQASKATVLERNAAMFNNELMSDVKFIVGGEFDIDPIQTIP 231
            .|.|..:..|.|.|         ||||:|.||.||.|.:||||::.||.|:||....   .|.:|
Mouse    55 DAQAVGDERDDAGPGALLREPVYNWQATKPTVQERFAFLFNNEVLCDVHFLVGKGLS---SQRVP 116

  Fly   232 AHKYILATGSSVFYAMFYGGLAENKQEIKVPDVEPTAFLTLLRYLYCDEIKLEPEHILATLYAAK 296
            ||:::||.||:||.|||.||:|....||::|||||.|||.||::||.||:::.||.::.|||.||
Mouse   117 AHRFVLAVGSAVFDAMFNGGMATTSTEIELPDVEPAAFLALLKFLYSDEVQIGPETVMTTLYTAK 181

  Fly   297 KYIVPHLARACVNYLEVKLTAKNACLLLSQSRLFEEPELMQRCWEVIDAQAEMAVKSEDFVDIDL 361
            ||.||.|...||.:|:..|.|.||.:||:|:|||:||:|...|.|.||.....|:.:|.|.||||
Mouse   182 KYAVPALEAHCVEFLKKHLRADNAFMLLTQARLFDEPQLASLCLESIDKNTADAIAAEGFTDIDL 246

  Fly   362 KTFESILSRETLNCKEIHLFEAALNWAMNACEKMSIDDTPQNKRRLLGQALHLIRIPTMSLEEFA 426
            .|..::|.|:||..:|:.||.|.:.|:...|::..:..||:|||::||:||.|||.|.|::||||
Mouse   247 DTLVAVLERDTLGIREVRLFNAVVRWSEAECQRQQLQVTPENKRKVLGKALSLIRFPLMTIEEFA 311

  Fly   427 ------NGVAQTGILSSQETIDMFLHFTAKMKPSLGFPTRSRAGLKTQVC--HRFQSCAYRSNQW 483
                  .|.||:|||..:|.:.:|||||...||.:.|..|.|..|:.:.|  :|||..   .::|
Mouse   312 AASPLPAGPAQSGILVDREVVSLFLHFTVNPKPRVEFIDRPRCCLRGKECSINRFQQV---ESRW 373

  Fly   484 RYRGRCDSIQFSVDRRIFIVGFGLYGSSTGAANYNVKIELKRL--GRTLAENDTKFFSDGSSNTF 546
            .|.|..|.|:|||::|||:||||||||..|..:|.|.|::...  ...|.:|||.|..|||::||
Mouse   374 GYSGTSDRIRFSVNKRIFVVGFGLYGSIHGPTDYQVNIQIIHTDSNTVLGQNDTGFSCDGSASTF 438

  Fly   547 HVFFENPIQIEPECYYTASVILDGNELSFFGQEGMSEVLMGNVT------FQFQCSSESTNGTGV 605
            .|.|:.|:::.|...|||...|.|.: |.:|.:|:.:|...:.|      |.|..::.:.|||.|
Mouse   439 RVMFKEPVEVLPNVNYTACATLKGPD-SHYGTKGLRKVTHESPTTGAKTCFTFCYAAGNNNGTSV 502

  Fly   606 QGGQIPELIFY 616
            :.|||||:|||
Mouse   503 EDGQIPEVIFY 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
luteNP_001262663.1 BTB 204..311 CDD:279045 55/106 (52%)
BTB 213..315 CDD:197585 52/101 (51%)
BACK 321..427 CDD:197943 49/111 (44%)
PHR 472..615 CDD:285277 61/150 (41%)
Btbd2NP_001366013.1 BTB_POZ_BTBD1_2 78..204 CDD:349590 68/128 (53%)
BACK_BTBD2 200..305 CDD:350598 48/104 (46%)
PHR 364..513 CDD:400388 62/152 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833897
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000758
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3806
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.870

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