DRSC/TRiP Functional Genomics Resources

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Protein Alignment lute and Tdpoz1

DIOPT Version :9

Sequence 1:NP_001262663.1 Gene:lute / 42089 FlyBaseID:FBgn0262871 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_683751.2 Gene:Tdpoz1 / 207213 MGIID:2449436 Length:365 Species:Mus musculus


Alignment Length:178 Identity:49/178 - (27%)
Similarity:79/178 - (44%) Gaps:19/178 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 MFNNELMSDVKFIVGG-EFDIDPIQTIPAHKYILATGSSVFYAMFYGGLAEN-KQEIKVPDVEPT 267
            ::.|.|.:|...:|.| ||        .|||.|||..|.||.|||...:.|: |..||:.::.|.
Mouse   181 LWENSLFTDCCLLVAGHEF--------RAHKAILAARSPVFRAMFEHEMKESLKTPIKIHNLNPQ 237

  Fly   268 AFLTLLRYLYCDEIKLEPEHILA--TLYAAKKYIVPHLARACVNYLEVKLTAKNACLLLSQSRLF 330
            .|..::.::|..:......|.:|  .|.||.||.:..|...|.:.|...|:.|||...|..:.|.
Mouse   238 VFKEMMGFIYTGKAPHLHSHSMACDVLPAADKYGLVSLKVLCEDALCRNLSVKNATHTLILADLH 302

  Fly   331 EEPELMQRCWEVIDAQAEMAVKSEDFVDI-------DLKTFESILSRE 371
            ...:|..:..:.|...|....::.::..|       ..:.|:|:.|.:
Mouse   303 STEKLKTQALDFIAYYASEVCETSEWKSILESHPHLVAEAFQSLASAQ 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
luteNP_001262663.1 BTB 204..311 CDD:279045 35/109 (32%)
BTB 213..315 CDD:197585 34/105 (32%)
BACK 321..427 CDD:197943 9/58 (16%)
PHR 472..615 CDD:285277
Tdpoz1NP_683751.2 MATH 16..154 CDD:295307
BTB 178..284 CDD:279045 35/110 (32%)
BTB 189..287 CDD:197585 34/105 (32%)
SPOP_C 287..349 CDD:269807 12/61 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833936
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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