DRSC/TRiP Functional Genomics Resources

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Protein Alignment Brf and brf2

DIOPT Version :9

Sequence 1:NP_001163636.1 Gene:Brf / 42087 FlyBaseID:FBgn0038499 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_001003536.1 Gene:brf2 / 445142 ZFINID:ZDB-GENE-040801-43 Length:423 Species:Danio rerio


Alignment Length:494 Identity:107/494 - (21%)
Similarity:186/494 - (37%) Gaps:136/494 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CRNCGSNEIEEDNARGDR--VCMNCGSVLEDSLIVSEVQFEEVGHGAAAIGQFVSAESSGGATNY 69
            |..|||:.:.||:....:  ||.:||||:.:.|:.:.:  .|..| :.|:..|.|.         
Zfish     5 CPECGSSRVVEDDLYSQKQWVCEDCGSVVSEGLLTTTL--SEESH-SRAVPFFTST--------- 57

  Fly    70 GYGKFQVGSGTESREVTIKKAKKDIT-------LLCQQLQLSQHYADTALNFFKMALGR----HL 123
                           ...||..:::.       .||:..:||....|.:.|.|:.|...    |:
Zfish    58 ---------------AAFKKPCRNLVSGFSRLRALCRIFRLSSSMEDASANLFERAYNHPNFLHI 107

  Fly   124 TRGRKSTHIYAACVYMTCRTE------GTSHLLIDISDVQQICSYELGRTYLKLSHALCINIPSL 182
            :..:|.. :...|::..||..      ||...|:|..      :|::|..|.:|:.:|  |:.:.
Zfish   108 SLSKKQI-LAGCCMFHICRQNSWPVFMGTIGYLLDAD------NYQMGTIYQELTKSL--NLQTT 163

  Fly   183 DPCLYIM--RFANRLQLGA-KTHEV-SMTALRIVQR------MKKDC-MHSGRRPTGLCGAALLI 236
            ..|:..|  .|....:|.. :..|| |:...|:|.:      :..|. :.:||||..|..||:.:
Zfish   164 QVCITRMLESFCYDFKLAPDEVEEVFSVAQQRLVDQTSALLELAADTWILTGRRPFPLFLAAVYV 228

  Fly   237 A-ARMHDFSRTMLDVIGVVKI----------HESTLRKRLSEFAETPSGGLTLEEFMTVDLEREQ 290
            | ..::..:|....::...||          .:.|:.|||:|..|           :...|.||.
Zfish   229 AWQSLNPLARMKYSLMKFCKIAKAPEQLWCKSKDTINKRLNELLE-----------VLCKLGREL 282

  Fly   291 DPPSFKAARKKDRERIKDMGEHELTELQKEIDAHLEKDLGKYSNSVYRQLTKGKGLSPLSSPSTP 355
              |..:.                 |::|......|.:|:.|:..::.....|             
Zfish   283 --PWVRP-----------------TDIQMNTVTTLVEDILKHRKALLIMAVK------------- 315

  Fly   356 NSSSEKDIELEESRQFIEQSNAEVIKELIAKNEDVK---KSEPGGLVAGIEGLRPDIEAICRVTQ 417
              ..||.:|..::.|:.|       .||......|:   ||.|.....|.| |.||......:..
Zfish   316 --HYEKQLEETQTSQYSE-------SELSDSKSSVQTQCKSPPDEEDEGCE-LPPDHWGKRHLFL 370

  Fly   418 SDLEDVEKAKQPQEQEL-IT--DDLNDDELDQYVLTEEE 453
            ......:|.::..|..| :|  :|::|.|::.|:.:|||
Zfish   371 PPCVRTQKRQKINEAPLEVTGDEDISDSEIESYIRSEEE 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BrfNP_001163636.1 TF_Zn_Ribbon 5..44 CDD:285471 13/38 (34%)
SUA7 6..270 CDD:224323 69/303 (23%)
CYCLIN 108..164 CDD:294043 14/65 (22%)
CYCLIN 183..268 CDD:238003 25/106 (24%)
BRF1 441..531 CDD:285040 6/13 (46%)
brf2NP_001003536.1 SUA7 5..275 CDD:224323 70/316 (22%)
TF_Zn_Ribbon 5..>35 CDD:285471 12/29 (41%)
CYCLIN 73..>121 CDD:214641 11/48 (23%)
Repetitive region 171..245 17/73 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..358 10/40 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1405
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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