DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIa and beat-VI

DIOPT Version :9

Sequence 1:NP_001287375.1 Gene:beat-IIa / 42086 FlyBaseID:FBgn0038498 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001263035.1 Gene:beat-VI / 43377 FlyBaseID:FBgn0039584 Length:332 Species:Drosophila melanogaster


Alignment Length:303 Identity:94/303 - (31%)
Similarity:137/303 - (45%) Gaps:34/303 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MGHQRATDTGHRQIRSHRKSD-CR---TFPARCLLLLLGVLLLSMELVECALRNVNLIIEPPAVR 81
            |..||.........:..|.|. ||   ...|..:|.|..:::..:.|....|:::.:.: |.||.
  Fly     1 MASQRIRSRPEEGRKGRRMSSACRPGALHTAFNMLALSWIIISELLLSAHCLKDLKIFV-PEAVL 64

  Fly    82 RGQHVVLRCMYDLDGAPLYSAKFYRGQLEFYRYTPGEFPNTKVFPFPGIHVDVSSSNATQVLLRN 146
            .|....|.|.|||:.|.||:.::|.||.|||||.|.|...|.||...||:||:::|:||.|.|:.
  Fly    65 MGNAATLSCQYDLEQAALYAVRWYFGQEEFYRYVPREAKPTFVFAVAGINVDLANSDATSVTLKG 129

  Fly   147 VGFGLSGNFSCEVTADAPLFSTATAVDTMQVVELPEKRPQVFTEHTRYEPGDVLRANCSTPPSRP 211
            |...|||::.|||:.|||||.|......|||:|||:..|.:..:.......|..:|.|:..||.|
  Fly   130 VTRELSGSYQCEVSEDAPLFHTEIRSAHMQVIELPKDDPVMQVDKKVIGVNDNFKAVCTVGPSYP 194

  Fly   212 RAELTFTINNMVITHVDTEYIRTIDNLIATRISLKMQLQGIHFSSVNPAIYNNVYGL----NSVY 272
            .|.:|::||...|.....:           |||.........:||::  ||.|...|    .:.|
  Fly   195 PANITWSINGNQIRRTPLQ-----------RISQDTYEGSTTYSSLD--IYPNSQALQGFFETKY 246

  Fly   273 GHGGPVYAPNSNPGGLLLRCSAQIGDLYQEYKEIELGTPQKDP 315
            .|            .:.|:|...|..:|.:.....:|.....|
  Fly   247 QH------------SVNLQCVVTIRHMYHKVVAQRIGLNAAPP 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIaNP_001287375.1 PTZ00491 <209..>261 CDD:240439 12/51 (24%)
beat-VINP_001263035.1 Ig 66..142 CDD:416386 36/75 (48%)
Ig strand B 67..76 CDD:409353 2/8 (25%)
CDR1 76..83 CDD:409353 3/6 (50%)
Ig strand C 83..91 CDD:409353 2/7 (29%)
FR2 84..91 CDD:409353 1/6 (17%)
CDR2 94..108 CDD:409353 7/13 (54%)
Ig strand C' 94..99 CDD:409353 4/4 (100%)
Ig strand C' 102..104 CDD:409353 0/1 (0%)
FR3 109..143 CDD:409353 15/33 (45%)
Ig strand D 117..121 CDD:409353 0/3 (0%)
Ig strand E 123..127 CDD:409353 2/3 (67%)
Ig strand F 136..144 CDD:409353 4/7 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000798
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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