DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIa and beat-Vb

DIOPT Version :9

Sequence 1:NP_001287375.1 Gene:beat-IIa / 42086 FlyBaseID:FBgn0038498 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001262511.1 Gene:beat-Vb / 41583 FlyBaseID:FBgn0038092 Length:328 Species:Drosophila melanogaster


Alignment Length:259 Identity:76/259 - (29%)
Similarity:123/259 - (47%) Gaps:22/259 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LLLLGV-LLLSMELVECALRNVNLIIEPPAVRRGQHVVLRCMYDLDGAPLYSAKFYRGQLEFYRY 114
            ||.||| :||.:..::| ||..::.: |..|....:|.|.|.||:.|..|.|.|:|:...||:||
  Fly     7 LLQLGVHMLLVVRRIQC-LRVTDINV-PQIVDFRDNVTLSCSYDISGHTLNSVKWYKNGKEFFRY 69

  Fly   115 TPGEFPNTKVFPFPGIHV----DVSSSNATQVLLRNVGFGLSGNFSCEVTADAPLFSTATAVDTM 175
            :|...|....|...|:.:    :..:.::.:|.|..:|...||.:.|||:.|||.|........|
  Fly    70 SPLTPPTYIPFAVEGVQLIDDGNECNESSCRVELNLLGVKSSGVYRCEVSGDAPHFQLTARDANM 134

  Fly   176 QVVELPEKRPQVFTEHTRYEPGDVLRANCSTPPSRPRAELTFTINNMVITHVD--TEYIRTIDNL 238
            .|..||:..|.:.:.|:.|...|.:..||||..|.....:|:.:|.:.::.||  ..:..||   
  Fly   135 TVEALPQNNPLISSFHSTYRFNDFVEVNCSTDFSSLFTRITWYVNGIKVSLVDLLPSFETTI--- 196

  Fly   239 IATRISLKMQLQGIHFSSVNPAIYNNVYGLNSVYGHGGPVYAPNSNPG--GLLLRCSAQIGDLY 300
            :|...|::..:..::|.:..|..:.  ..|..:......:     :|.  ||.|||.|:| |.|
  Fly   197 VAHGYSMRRIVSQLNFYANEPRFHQ--LQLQKLIQQKRTI-----SPARLGLELRCVAEI-DRY 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIaNP_001287375.1 PTZ00491 <209..>261 CDD:240439 11/53 (21%)
beat-VbNP_001262511.1 IG_like 39..121 CDD:214653 26/81 (32%)
Ig 41..130 CDD:143165 30/88 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451060
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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