DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIb and beat-Vc

DIOPT Version :10

Sequence 1:NP_650613.2 Gene:beat-IIb / 42082 FlyBaseID:FBgn0038494 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001356887.1 Gene:beat-Vc / 41575 FlyBaseID:FBgn0038084 Length:297 Species:Drosophila melanogaster


Alignment Length:279 Identity:80/279 - (28%)
Similarity:107/279 - (38%) Gaps:48/279 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LLLCLFCDFGQAALRDVNL--LVEPPAVRRGQSVALRCDYQLVEAPLYSIKFYRGQMEFYRYTPG 145
            |||..|..........::|  |..|..:...|...|.|.|.:....|.|:|:|:..:||:||:|.
  Fly    10 LLLATFNGMAPVPAEGLHLSNLSVPRIIDVAQKAKLFCSYAMGNRTLNSVKWYKDGLEFFRYSPL 74

  Fly   146 EYPPTKVFQFPGIRVDENGSNATTVLIRNVSF-----GLSGQFSCEVTADAPLYSTATAFAQMQV 205
            ..|.|..|...|:.: .:||......|.||..     ..|||:.|||:.|||.:......|.|.|
  Fly    75 TPPTTNWFPVKGVTI-ADGSPHCNQFICNVELEKLTAHSSGQYRCEVSGDAPEFKLIDQTANMTV 138

  Fly   206 VEFPEKRPQLFTEHSRYEPGDVLRANCSTLPSRPRADLRFTINN--IPVSIPFTEETQYIRTVDS 268
            ...|:..|.:......|:..|.|.|||||..|.|.|.|.:.|||  .|......:..:..|.||.
  Fly   139 GVLPKFDPFISGVRHAYKYHDYLEANCSTEMSSPMAKLTWYINNKTAPGHSLQPQINEVSRNVDG 203

  Fly   269 --LIASRLSLKLQLQATHFVAGLSAHGNGNGNGNGNGNGNGNGLANALHLGGGGGGAGGGGLILR 331
              |.||.|.|:|.|....|::....                                    |.||
  Fly   204 FHLFASHLHLRLHLDDQRFISKSEM------------------------------------LELR 232

  Fly   332 CTAQIGDLYQEYKEIELGT 350
            |||.|..|....:|..:.|
  Fly   233 CTADIMGLAAVRRESRVRT 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIbNP_650613.2 IG_like 108..198 CDD:214653 31/94 (33%)
beat-VcNP_001356887.1 None

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