DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mur89F and CG10154

DIOPT Version :9

Sequence 1:NP_001262662.1 Gene:Mur89F / 42080 FlyBaseID:FBgn0038492 Length:2159 Species:Drosophila melanogaster
Sequence 2:NP_001189089.1 Gene:CG10154 / 39509 FlyBaseID:FBgn0036361 Length:316 Species:Drosophila melanogaster


Alignment Length:282 Identity:55/282 - (19%)
Similarity:85/282 - (30%) Gaps:79/282 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1806 NCSSEGFFPDPEDCSRYYR-----------CVDAAKNGKYQVYAFK-CGKGTVWDTSTETCNYAD 1858
            |.:...:.|...:||:|..           |:|.||:........| |..|  :|...:.|.|.:
  Fly    60 NVADGVYLPYVGNCSKYIECENNTIKEVGSCLDLAKDNPDICDPNKSCELG--YDPVLQVCTYME 122

  Fly  1859 QVS--GNCSSGQTTT---PGTTTEPGTTESTTSSGKPETTSKAPENTTTWAPETTTTSSPETTTT 1918
            :|.  ..|.|.:.::   ..|.|:    ......|||  ..:...:...:...|.....||....
  Fly   123 EVQCLPTCESFRLSSFCYDNTCTK----YVLCYYGKP--VLRQCHDGLQYNNATDRCDFPEYVDC 181

  Fly  1919 VASETTTTTSGTTTTATPETTTKPPKPETTTIAGEETSTSKSPTTTE--------SPAPSTNTSA 1975
            ||::.:.|.                :||.....|.:.|.||....:.        :|..:.|.|.
  Fly   182 VANDCSATF----------------QPEDIIYLGSKASCSKYYVCSNGHPWEQQCAPGLAYNPSC 230

  Fly  1976 PCPETGPGQNVYV---------------------CP---TGFRRHPEKCGMFYQCSESADNNDLN 2016
            .|.:.....|..:                     ||   |.|..|..:...:|.|.|...     
  Fly   231 KCCDFAKNVNCTIDAVARNILPYSRTPLRRADIKCPLMGTHFFPHKSRRDAYYYCVEGRG----- 290

  Fly  2017 IVVFQCPNGTVYQDKSCSCGKP 2038
             |...|..|..|..|...|.:|
  Fly   291 -VTLDCTPGLYYDPKVEDCRRP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mur89FNP_001262662.1 CBM_14 57..106 CDD:279884
CBM_14 200..250 CDD:279884
CBM_14 484..536 CDD:279884
CBM_14 745..798 CDD:279884
CBM_14 1025..1074 CDD:279884
CBM_14 1206..1261 CDD:279884
CBM_14 1336..1388 CDD:279884
CBM_14 1523..1577 CDD:279884
VAD1-2 <1599..>1656 CDD:291956
CBM_14 1809..1861 CDD:279884 14/63 (22%)
CG10154NP_001189089.1 CBM_14 130..180 CDD:279884 10/55 (18%)
CBM_14 197..239 CDD:279884 8/41 (20%)
ChtBD2 263..311 CDD:214696 14/53 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23301
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.