DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mur89F and CG32302

DIOPT Version :10

Sequence 1:NP_001262662.1 Gene:Mur89F / 42080 FlyBaseID:FBgn0038492 Length:2159 Species:Drosophila melanogaster
Sequence 2:NP_728732.1 Gene:CG32302 / 38293 FlyBaseID:FBgn0052302 Length:313 Species:Drosophila melanogaster


Alignment Length:341 Identity:71/341 - (20%)
Similarity:99/341 - (29%) Gaps:132/341 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1799 PEPQPNYNCSSEGFFPDPEDCSRYYRCVDAAKNGKYQVYAFKCGKGTVWDTSTETCNYADQVSGN 1863
            |:..| ::|...|.||||.||.||:.|.|.:.:...     .|..|..:.|.|.|| ...:.|..
  Fly    86 PKRGP-FSCQQAGLFPDPYDCRRYHECSDQSVDTPR-----ICSNGAGYSTLTGTC-VLPRESEQ 143

  Fly  1864 CSSGQTTTPGTTTEPGTTESTTSSGKPETTSKAPENTTTWAPETTTTSSPETTTTVASETTTTTS 1928
            |               ..|..|.|...:....||:|...:.....|.:|.........|.....|
  Fly   144 C---------------IQEQFTCSRSGQVGGWAPDNRYFYVCVNDTANSLYPLMMKCHEGFVFNS 193

  Fly  1929 GTTTTATPETTTKPPKPETTTIAGEETSTSKSPTTTESPAPSTNTSAPCP---------ETGPGQ 1984
               .:..|                 :|.:.:|....||.....|....||         :...|:
  Fly   194 ---YSCVP-----------------DTRSMRSIQAMESHTCMNNDRYQCPFRTSEIEYCKCVDGE 238

  Fly  1985 -NVYVCPTGFRRHPE--KC--GMFYQCSESADNNDLNIVVFQCPNGTVYQDKSCSCGKPPAGDKC 2044
             .|..||.||:..|:  .|  ...||||:        ..:..|||                    
  Fly   239 LEVMTCPAGFQIDPKILTCVTDRIYQCSD--------FEILSCPN-------------------- 275

  Fly  2045 SKDMKRTTNAFEEETKLQNVVQISTTDPLCPDEGHFALNNDQCGQLFVKCGFSELTGRIEGQIHR 2109
                                  :||.|..|....|         ||               ||:.
  Fly   276 ----------------------VSTKDEYCICIDH---------QL---------------QIYS 294

  Fly  2110 CPQGFAYWNV-SRRCE 2124
            ||.| .|:|. :|:|:
  Fly   295 CPMG-QYFNAETRKCQ 309

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Mur89FNP_001262662.1 CBM_14 57..106 CDD:426342
CBM_14 200..246 CDD:426342
CBM_14 484..536 CDD:426342
CBM_14 745..798 CDD:426342
CBM_14 1025..1075 CDD:426342
CBM_14 1206..1261 CDD:426342
CBM_14 1336..1387 CDD:426342
CBM_14 1523..1577 CDD:426342