DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mur89F and Mur2B

DIOPT Version :9

Sequence 1:NP_001262662.1 Gene:Mur89F / 42080 FlyBaseID:FBgn0038492 Length:2159 Species:Drosophila melanogaster
Sequence 2:NP_001284789.1 Gene:Mur2B / 31111 FlyBaseID:FBgn0025390 Length:1795 Species:Drosophila melanogaster


Alignment Length:1217 Identity:315/1217 - (25%)
Similarity:436/1217 - (35%) Gaps:343/1217 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   994 NQSSSNQSSSSNQTSSSTTQKPFKPAEKCESEETFLADNENCSKFYRCVDNGKGGFTKVSFTCPP 1058
            :|..|.:.|.|........:..|   .:|..|.||.:..: |:.:|.|.....|.:.:..|.||.
  Fly   196 DQCPSTEISDSGSYIPQNCELKF---PECAEEGTFRSPTD-CALYYTCRLQESGTYLQTRFKCPG 256

  Fly  1059 NTLWDPEANSCN------------HPDQIQTKP-----------------------------LKC 1082
            :..:|.|...|.            .|.|:...|                             ||.
  Fly   257 SNSFDLERKLCRPRSEVDCFDFVPGPVQVPYAPQPYYPPYPAAPPLYEEDDYDTGAREQQPALKS 321

  Fly  1083 KK--VVSQGGSSSN-------STSNSSSSSNNSGSSSNSGSSSSSSSSNSGSSSNTGSSSNSGAS 1138
            :|  |.::|....:       :|:...|::.:...:..|..|...||.:.|...   ::.|....
  Fly   322 EKLQVAAEGFEKPSLNVVVLQTTTLEPSTAYHKYPAYPSYPSYEYSSHHRGKER---AAENLELE 383

  Fly  1139 SSGGSSNQGSSSNSGSSSGSNSSGNQSTSSSTSSSSSSSNNNNQGSSSSSSSSSSSTSSKPNPSE 1203
            ..|.......|.|...        ...|.::.:::....|:.|:......:..:........|..
  Fly   384 KEGVPRKLKLSENIVI--------QPETPATAATTREPLNDINKYQYKRYTYGTDKNDVTEAPEI 440

  Fly  1204 TCKVNGQFIGDRSDCAKFYRCVDNDRGGFNMV--PFSCGPGTVWDAQMQACNHAWAVKECGGIAP 1266
            ...:.|..:.:                  |:|  |.:....|.....:        |..|..|:|
  Fly   441 KSPLKGLHLSE------------------NIVILPETTTTTTTTTKPV--------VLTCPTISP 479

  Fly  1267 P-TTSTPTTSRPTTASTSRPSDQTSTSRPTGPPTTARPVTARPTTSSPTTASSSQTTSPVTQAPN 1330
            | ||..|:|:...|.||.:.|.....|..|...||    |.||||  .|..:||.|..|.|....
  Fly   480 PDTTPKPSTTTAVTKSTPKISSTEQHSTTTAKTTT----TKRPTT--VTEKTSSATEKPRTTVVT 538

  Fly  1331 TDGKCRSEGFMADPNNCSKFYRCVRNNKGGFTSIPFQCGAGTVWDQDLQTCNHNFNNCSTGTEST 1395
            |..:.||                                          |..|   |.|..|::|
  Fly   539 TTTQKRS------------------------------------------TTTH---NTSPDTKTT 558

  Fly  1396 TPKPPCEPATNGTTATSTSSTTTP----PPTTTDLPPTSTTGLPPTTT-----TELPPTT---TT 1448
            .......|.|..|.:|:|.|||||    |.|||....|.:|..|.|||     |..|.||   ||
  Fly   559 IRSTTLSPKTTTTPSTTTPSTTTPSTTTPSTTTPSTTTPSTTTPSTTTTVKVSTHRPRTTSQKTT 623

  Fly  1449 DLPPTT--TTRLPPTTTTSLPPTTTTGLPPTTTTGAQPTTTTLSSETETSTVTTSPESTTQPP-- 1509
            ....||  ||..|.||.|:..||:||....|||   |.||||....|..:|.|..|::||:..  
  Fly   624 TASTTTKKTTTSPKTTKTTDIPTSTTSKLSTTT---QKTTTTTHKFTAATTSTEKPKTTTEKTST 685

  Fly  1510 -STTTMKPL---PAGTECTGEGYMADPEDCRKYYRCINAGASYRKYNFTCPKGTGWNEEVQTCDY 1570
             ||||.|..   |..|..||:     |.                    |.||.:           
  Fly   686 VSTTTKKSTESSPKPTSSTGK-----PT--------------------TTPKPS----------- 714

  Fly  1571 VENIPRCSKL--PAEPITTTPSEESKDPGSTTP--QSTDEPTTVTKPITKPTEEPSTEKPQKPTT 1631
            ....|..:|:  ..:..||||...|.:..||.|  .:|.:|||.|.....|....:|...:||.|
  Fly   715 TRTTPTTTKVTTTTQITTTTPLRSSTETTSTQPPTTTTPQPTTTTTLTVTPKTSTTTTTTEKPIT 779

  Fly  1632 QYPEKPTTTEEPEKPQKPTTTEYPQKPTTTEEPTPEKPQKPTTTEYPQKPTTTEEPTPEKPQKPT 1696
            ..| |||||.:......|.||:.  ..||.:|.||  .|..:||.:.:| |||..|.|...:||.
  Fly   780 SSP-KPTTTTQKTTSTAPNTTKV--AITTQKETTP--TQSTSTTIFTRK-TTTNNPEPTSTEKPI 838

  Fly  1697 TTEYPQKPTTEEPTTTSIPGYNPTTTSVP-------GYNPTTTPIPVETTTSTPGYKPTTTGEP- 1753
            |:..|:..||...|:|.......||.|.|       ..||||..:.....||:.....:||.|| 
  Fly   839 TSTTPKPSTTTPKTSTVASSTEKTTISSPKPTTEKSTENPTTNSVKTSALTSSTQRATSTTSEPT 903

  Fly  1754 -----ITTTT-LPSTTTDAIQEPTTS--KKPEPTTTTESPESSTPEGSVTTLQPEPQPNYNCSSE 1810
                 ||||| .|:|...:.||.|||  |....|.||:....|:|   :|||..| :||..    
  Fly   904 KTTQNITTTTPKPTTLKTSTQEATTSTQKVSTVTITTKKATESSP---LTTLSTE-EPNTT---- 960

  Fly  1811 GFFPDPEDCSRYYRCVDAAKNGKYQVYAFKCGKGTVWDTSTETCNYADQVSGNCSSGQTTTPGTT 1875
               |.|.                                                  :||||.||
  Fly   961 ---PKPL--------------------------------------------------RTTTPTTT 972

  Fly  1876 TEPGTTESTT---SSGKPETTS-KAPENTTTWAPETTTTSSPETTTTVAS--ETTTTTSGTTT-- 1932
            :...||..||   |....|||| :.|::||   |.:||.::|:.||.:.|  ..|||||.|:|  
  Fly   973 SVTATTRITTTTISESSTETTSTQKPKSTT---PTSTTRTTPKVTTVIVSTQNPTTTTSKTSTVT 1034

  Fly  1933 ---------TATPETTTKPPKPETTTIAGEETS--TSKSPTTTESPAPSTN-------TSAPCPE 1979
                     |..|.|||:.|    |:|....||  |::.|||| :|..||:       |..|||:
  Fly  1035 ITTPNPSPSTQRPTTTTRQP----TSITASTTSIGTTRIPTTT-NPQNSTSSTDLTTVTRPPCPD 1094

  Fly  1980 ---TGPGQNVYVCPTGFR-------RHPEKCGMF-YQCSESADNNDLNIVVFQ-CPNGTVYQDKS 2032
               |........|....:       :.|:|...| :..:.:|.....|.:..| .|:   |.|.:
  Fly  1095 PDSTSDKNTNTACTQELQQVNLLELQSPQKQEQFTHTRTHTALTGSRNTLGGQEVPD---YMDDA 1156

  Fly  2033 CSCGKPPAGDKCSKDMKRTTNAFEEETKLQNVVQISTTDPLCPDEGH 2079
            .|..:..:| :.:.....|.:.......||.:..|.:|.|  |...|
  Fly  1157 PSSAEAESG-QATTAKAPTMSTLAAAHLLQKLFHIISTTP--PSREH 1200

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Mur89FNP_001262662.1 CBM_14 57..106 CDD:279884
CBM_14 200..250 CDD:279884
CBM_14 484..536 CDD:279884
CBM_14 745..798 CDD:279884
CBM_14 1025..1074 CDD:279884 14/60 (23%)
CBM_14 1206..1261 CDD:279884 6/56 (11%)
CBM_14 1336..1388 CDD:279884 4/51 (8%)
CBM_14 1523..1577 CDD:279884 7/53 (13%)
VAD1-2 <1599..>1656 CDD:291956 21/58 (36%)
CBM_14 1809..1861 CDD:279884 2/51 (4%)
Mur2BNP_001284789.1 ChtBD2 88..136 CDD:214696