DRSC/TRiP Functional Genomics Resources

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Protein Alignment MEF2C and mbx2

DIOPT Version :10

Sequence 1:XP_047273173.1 Gene:MEF2C / 4208 HGNCID:6996 Length:511 Species:Homo sapiens
Sequence 2:NP_596507.1 Gene:mbx2 / 2540350 PomBaseID:SPBC317.01 Length:372 Species:Schizosaccharomyces pombe


Alignment Length:456 Identity:120/456 - (26%)
Similarity:161/456 - (35%) Gaps:138/456 - (30%)


- Green bases have known domain annotations that are detailed below.


Human     1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKV 65
            ||||||.|..|.|:|:|.|||.|||.||.||||||:||.|||:|:.:.:...:|..:.|:|..:.
pombe     1 MGRKKISIAPITDDRSRSVTFVKRKQGLYKKAYELAVLADCEVAVTVIDRKGRLHVFCSSDYQRT 65

Human    66 LLK------YTEYNEPH-------ESRTNSDIVET-----LRKKGLNGCDSPDPDADDSVGHSP- 111
            |.:      |...|..|       ||.|.|....|     |..|.|...|.|..|:....|.|| 
pombe    66 LQQLNTLSIYELKNRSHFSSSPVEESSTVSPETTTGSFTPLNNKHLKSQDQPLSDSQLDTGDSPA 130

Human   112 ESEDKYRKINEDIDLMISRQRLCALNKKENKGCESPDPDSSYALTPRTEEKYKKINEEFDNMIKS 176
            .||...:..|..:      |..|           .|:|.||                   |.::|
pombe   131 TSETTVQDYNPQV------QSYC-----------RPEPLSS-------------------NHVRS 159

Human   177 HKIPAVPPPNFEMPVSIPVSSHNSLVYSNPVSSLGNPNLLPLAHPSLQRNSMSPGVT-----HRP 236
              .|..||.....|       |....:..|.....|.|..|   |...::.:|||.|     |.|
pombe   160 --CPPFPPTQHHHP-------HTRPPHHPPHPHFHNNNYPP---PYCFQSPVSPGATVPLQHHSP 212

Human   237 -PSAGNTGGLMGGDLTSGAGTSAGNGYGNPR--------------NSPGLLVSPGNLNKNMQAKS 286
             ||                    .||:...|              .||.|...|..|..::    
pombe   213 YPS--------------------DNGFPGHRRQTHFAPYYYPQRATSPSLKQVPTYLGTHV---- 253

Human   287 PPPMNLGMNNRKPDLRVLIPPGSKNTMPSVNQRINNSQSAQSLATP--VVSVATPTLPGQGMGGY 349
                 |..:....|.:||:||.|..:.|  ||....:.|..:.|.|  :.....|.|.       
pombe   254 -----LQQDQSTYDQKVLMPPASYLSSP--NQYTLKNVSPGNPACPPFLYEHPNPQLT------- 304

Human   350 PSAISTTYG-----TEYSLSSADLSSLSGFNTASALHLGSVTGWQQ------QHLHNMPPSALSQ 403
            |.......|     |.||.||.:.|..:..||....:..|.:...|      |.:.::.|.:||.
pombe   305 PEMFDVKQGSPIPPTAYSGSSCETSQHTIANTPFLAYDRSPSLTNQEAESSFQDVASISPHSLSD 369

Human   404 L 404
            :
pombe   370 V 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MEF2CXP_047273173.1 ARG80 1..291 CDD:227400 89/328 (27%)
MADS_MEF2_like 2..78 CDD:238165 37/88 (42%)
HJURP_C 145..201 CDD:463543 11/55 (20%)
mbx2NP_596507.1 ARG80 1..372 CDD:227400 120/456 (26%)

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