DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smug and smug1

DIOPT Version :10

Sequence 1:NP_650609.1 Gene:Smug / 42078 FlyBaseID:FBgn0038490 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_001090786.1 Gene:smug1 / 100037877 XenbaseID:XB-GENE-953121 Length:274 Species:Xenopus tropicalis


Alignment Length:262 Identity:91/262 - (34%)
Similarity:145/262 - (55%) Gaps:10/262 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GEPTKTSARQGSTSEFFDKPLWLKFYETEVKLNEALEKLNPPESTPFIYNPIVYASQLHCDYLRR 80
            |.|:.|::.:...:.|.         :.|::||..|..|...:...::|||::||...|..|::.
 Frog    20 GVPSITASAECPANNFL---------KVELELNLKLSNLVFQDPIQYVYNPLLYAWAPHEKYVQT 75

  Fly    81 YMDGPKKLVFVGMNPGPNGMAQTGIPFGNVRTVKLLMQLAGSVDQPPVVHPKRPVAGLDCRIEEP 145
            |....|:::|:||||||.||||||:|||.|..|:..:|:.|.|.:|.|.||||.:.|.:|...|.
 Frog    76 YCQSRKEVLFLGMNPGPFGMAQTGVPFGEVNHVRNWLQIEGPVSKPEVEHPKRRIRGFECPQSEV 140

  Fly   146 SGVRLWELFLRLAGSMQTFSQQCFVHNFCPLAFFGADGRNITPSEIRGAYKNQLGDLCLHTLEEQ 210
            ||.|.|..|..|.|..:||.|.|||||.|||.|....|:|:||:::..|.:..|.::|...|.:.
 Frog   141 SGARFWSFFKSLCGQPETFFQHCFVHNHCPLIFMNHSGKNLTPTDLPKAQRETLLEICDEALCQA 205

  Fly   211 LKLLQPDVIVAVGEYVHSALKRSGYAKSNCVSVLRLPHPSPRSTN-NTNWPEKAQAFLEEHNLIR 274
            :::|...:::.||.:.....:::..|:...|:|..:.|||||:.. |..|.....|.|:|..::.
 Frog   206 VRVLGVKLVIGVGRFSEQRARKALTAEGIDVTVKGIMHPSPRNPQANKGWEGVVSAQLQELGVLS 270

  Fly   275 FM 276
            .:
 Frog   271 LL 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmugNP_650609.1 UDG-F3_SMUG1-like 39..269 CDD:381689 86/230 (37%)
motif A 92..96 CDD:381689 3/3 (100%)
smug1NP_001090786.1 UDG-F3_SMUG1-like 34..265 CDD:381689 87/239 (36%)
motif A 87..91 CDD:381689 3/3 (100%)

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