DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment m-cup and AT4G14390

DIOPT Version :9

Sequence 1:NP_650607.1 Gene:m-cup / 42076 FlyBaseID:FBgn0038488 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_193175.2 Gene:AT4G14390 / 827084 AraportID:AT4G14390 Length:694 Species:Arabidopsis thaliana


Alignment Length:422 Identity:92/422 - (21%)
Similarity:153/422 - (36%) Gaps:124/422 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 CEANIEQRGHFEVPEDNSFHYVSPLWAAVVSGKLSMVKYLVRIGCD----INATSDSGSTPVRSA 185
            |...:..|| ..|....|....|.|..||..|.|.:||.:|   |:    :...:.||.||:..|
plant   113 CLEKLRSRG-ISVARIKSNTGDSILHLAVTWGHLELVKEIV---CECPRLLLEQNSSGQTPLHVA 173

  Fly   186 CYMTHVDIVKFLVENGADIKRPNINGGTCLINSVQSVQLCLYLVRKGADINARDIQDK---TALH 247
            .:..|..||:..|                .:.:..|.:||   ..:...:|...::||   |||:
plant   174 AHSGHTTIVEAFV----------------ALVTFSSARLC---NEESERMNPYVLKDKDGNTALY 219

  Fly   248 YAIQEHRLDTTKLLIEQGAD-PYARSRYGDDALRTAC-------------------LKGAHHIFD 292
            |||:....:....|:....| |:..::||..:|..|.                   |||.....:
plant   220 YAIEGRYFEMAVCLVNANQDAPFLGNKYGVSSLFVAINTGDVSLVKAILKIIGNKDLKGKKSNLE 284

  Fly   293 FLKKQLHYTPARLAEAHELMG---STFLDEH----NESRV----CILHWRMAHHI---------- 336
             .|.|...:.|.:|...:.:.   ...|||:    :|..:    |:   .:|.||          
plant   285 -SKLQGQKSLAHVALVTQSIAGVLDVILDEYPSLMDERDINGWTCL---SLAAHIGYYEGVCNLL 345

  Fly   337 -RAAYSPYI-EKKPQVPLRTA----YENAVE------------FSTL-EELDNIATDMDAMRTQS 382
             |:....|: ::....|:.||    :||.||            .:.| :.:.:||.........:
plant   346 ERSTKGVYVCDQDGSFPIHTAAEKGHENIVEEFIKRCPGSKHLLNKLGQNVLHIAAKNGKFWISN 410

  Fly   383 LLICERVLGLTHKDMLFRLTFRGASYADSLQLQRCIDLWRFLLEVRVSNWSILHFETCFAAQALV 447
            :||       .:||            .:.|.:.:.:| ....|.:.|.||   ||:   :...|.
plant   411 MLI-------INKD------------TEHLGVGQDVD-GNTPLHLAVMNW---HFK---SITWLA 449

  Fly   448 RLMLDLHVQNSSHIRSDARARFVHQDKVLPRF 479
            |....|.|:|    ::..|||.:.:.:|.|.:
plant   450 RSSKILKVRN----KNGLRARDIAEREVKPHY 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
m-cupNP_650607.1 ANK repeat 101..175 CDD:293786 15/53 (28%)
Ank_2 <101..174 CDD:289560 15/52 (29%)
ANK 147..262 CDD:238125 31/121 (26%)
Ank_2 149..239 CDD:289560 22/93 (24%)
ANK repeat 177..208 CDD:293786 9/30 (30%)
ANK repeat 210..239 CDD:293786 4/28 (14%)
ANK repeat 241..271 CDD:293786 11/33 (33%)
Ank_4 244..294 CDD:290365 16/69 (23%)
ANK 591..>657 CDD:238125
Ank_2 591..>641 CDD:289560
ANK repeat 611..641 CDD:293786
AT4G14390NP_193175.2 ANK 127..268 CDD:238125 39/162 (24%)
Ank_2 136..239 CDD:289560 31/124 (25%)
ANK repeat 165..211 CDD:293786 13/64 (20%)
ANK repeat 213..238 CDD:293786 7/24 (29%)
ANKYR 291..505 CDD:223738 44/220 (20%)
ANK 319..448 CDD:238125 29/157 (18%)
ANK repeat 324..356 CDD:293786 6/34 (18%)
ANK repeat 358..390 CDD:293786 7/31 (23%)
ANK repeat 392..426 CDD:293786 8/52 (15%)
PGG 513..620 CDD:290670
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I2399
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X100
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

Return to query results.
Submit another query.