DRSC/TRiP Functional Genomics Resources

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Protein Alignment m-cup and AT4G05040

DIOPT Version :9

Sequence 1:NP_650607.1 Gene:m-cup / 42076 FlyBaseID:FBgn0038488 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001031584.1 Gene:AT4G05040 / 825846 AraportID:AT4G05040 Length:572 Species:Arabidopsis thaliana


Alignment Length:326 Identity:64/326 - (19%)
Similarity:129/326 - (39%) Gaps:78/326 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VELTKLSHDLIEEC-----KRSQEDSL---LSRHLRHEL-------------EKLPRDSRREL-- 95
            :||.|   ::|.||     :.:.:|.|   ::.|..|..             ::|..:.|..|  
plant   128 LELVK---NIISECPCLVLELNFKDQLPLHVAAHAGHSAIVEALVASVTFFSDRLAEEDRERLNP 189

  Fly    96 -VRKQRNGCAPLFIACKRGAVDIAEYLITICEANIEQRGHFEVPEDNSFHYVSPLWAAVVSGKLS 159
             |.:.:.|...|.:|.:...:::|..|:     |..|...|  .|:|  ..:|.|:.||.:|.::
plant   190 YVLRDKYGNTALHLAIEGRYMEMAASLV-----NENQNASF--LENN--EGISSLYMAVEAGDVT 245

  Fly   160 MVKYLVRI--GCDINATSDSGSTPVRSACYMTHVDIVKFLVENGADI--------KRPNI----- 209
            :||.:::.  ..|:...:.:..:.:....::.||.:      |...|        :.|::     
plant   246 LVKEILKTAGNNDLEGRNSNLDSKLEGRKHLVHVAL------NARSIGVLDVILNEYPSLEDERD 304

  Fly   210 -NGGTCL-----INSVQSVQLCLYLVRKGADINARDIQDKTALHYAIQEHRLDTTKLLIEQGADP 268
             .|.|||     |...:.|  |..|.|...::...|......:|.|.:...:...|.::::  .|
plant   305 EEGRTCLSFAASIGFYKGV--CNLLDRSTKNVYVCDEDGSFPIHTAAENGHIRIVKEILKR--CP 365

  Fly   269 YAR---SRYGDDALRTACLKGAHHIFDFLKKQLHYTPARLAEAHELMGSTFLDEHNESRVCILHW 330
            :::   ::.|.:.|..|...|.|::...|.:.  .....|....::.|:|.|      .:.:|:|
plant   366 HSKHMLNKLGQNVLHIAAKIGEHNLVKSLMRS--DDTKHLGVGQDVDGNTPL------HLAVLNW 422

  Fly   331 R 331
            |
plant   423 R 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
m-cupNP_650607.1 ANK repeat 101..175 CDD:293786 18/75 (24%)
Ank_2 <101..174 CDD:289560 18/74 (24%)
ANK 147..262 CDD:238125 26/135 (19%)
Ank_2 149..239 CDD:289560 21/110 (19%)
ANK repeat 177..208 CDD:293786 4/38 (11%)
ANK repeat 210..239 CDD:293786 9/33 (27%)
ANK repeat 241..271 CDD:293786 4/29 (14%)
Ank_4 244..294 CDD:290365 9/52 (17%)
ANK 591..>657 CDD:238125
Ank_2 591..>641 CDD:289560
ANK repeat 611..641 CDD:293786
AT4G05040NP_001031584.1 ANK 111..251 CDD:238125 31/134 (23%)
ANK repeat 114..146 CDD:293786 6/20 (30%)
Ank_2 119..222 CDD:289560 20/101 (20%)
ANK repeat 148..194 CDD:293786 8/45 (18%)
ANKYR 176..394 CDD:223738 46/236 (19%)
ANK 301..421 CDD:238125 24/131 (18%)
ANK repeat 306..338 CDD:293786 9/33 (27%)
ANK repeat 340..372 CDD:293786 4/33 (12%)
ANK repeat 374..408 CDD:293786 7/35 (20%)
Ank_2 379..>447 CDD:289560 12/53 (23%)
PGG 495..>571 CDD:290670
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I2399
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X100
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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