DRSC/TRiP Functional Genomics Resources

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Protein Alignment m-cup and ankrd46b

DIOPT Version :10

Sequence 1:NP_650607.1 Gene:m-cup / 42076 FlyBaseID:FBgn0038488 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_991159.1 Gene:ankrd46b / 402888 ZFINID:ZDB-GENE-050114-7 Length:228 Species:Danio rerio


Alignment Length:114 Identity:38/114 - (33%)
Similarity:54/114 - (47%) Gaps:17/114 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 PLFIACKRGAVDIAEYLI-TICEANI-EQRGHFEVPEDNSFHYVSPLWAAVVSGKLSMVKYLVRI 167
            ||..||..|.:..|..|: |.|:.|| :.||.            :.|..|...|.:.:.::|.:.
Zfish    15 PLLQACIDGDLSFARRLLETGCDPNIRDHRGR------------TGLHLAAARGNVDICRFLHKF 67

  Fly   168 GCDINATSDSGSTPVRSACYMTHVDIVKFLVENGADIKRPNINGGTCLI 216
            |.|:.||...|:|.:. .|  .|||.::|||.||..|...|.||.|.|:
Zfish    68 GADLLATDYQGNTALH-LC--GHVDTIQFLVSNGLKIDICNHNGSTPLV 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
m-cupNP_650607.1 ANK repeat 101..175 CDD:293786 20/71 (28%)
Ank_2 <101..174 CDD:463710 19/70 (27%)
ANKYR <147..298 CDD:440430 25/70 (36%)
ANK repeat 177..208 CDD:293786 12/30 (40%)
ANK repeat 210..239 CDD:293786 4/7 (57%)
ANK repeat 241..271 CDD:293786
ANKYR <591..>657 CDD:440430
ANK repeat 611..641 CDD:293786
ankrd46bNP_991159.1 ANK 1 11..40 9/24 (38%)
ANKYR <15..>128 CDD:440430 38/114 (33%)
ANK repeat 15..42 CDD:293786 11/26 (42%)
ANK repeat 44..75 CDD:293786 9/42 (21%)
ANK 2 44..73 8/40 (20%)
ANK repeat 77..105 CDD:293786 12/30 (40%)
ANK 3 77..103 12/28 (43%)
ANK 4 107..138 4/7 (57%)
Blue background indicates that the domain is not in the aligned region.

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