DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment m-cup and fem1a

DIOPT Version :9

Sequence 1:NP_650607.1 Gene:m-cup / 42076 FlyBaseID:FBgn0038488 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_956131.1 Gene:fem1a / 327613 ZFINID:ZDB-GENE-030131-5824 Length:617 Species:Danio rerio


Alignment Length:642 Identity:202/642 - (31%)
Similarity:319/642 - (49%) Gaps:73/642 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LEKLPRDSRRELVRKQRNGCAPLFIACKRGAVDIAEYLITICEANIEQRGHFEVPEDNSFHYVSP 148
            :.|.| :.|..|..::..|..||.||.:.|.:.:..:|:..|.||:...|.... :..:.....|
Zfish    24 INKSP-EERAALAEERTEGGTPLLIAARYGHLPVVHFLLERCGANVALGGSVNF-DGETIEGAPP 86

  Fly   149 LWAAVVSGKLSMVKYLVRIGCDINATSDSGSTPVRSACYMTHVDIVKFLVENGADIKRPNINGGT 213
            ||||..:|.|.:||.|:..|..:|.|:.:.|||:|:||:..|::||::|||:.||::..|.:|.|
Zfish    87 LWAASAAGHLPVVKALLEHGAPVNNTTLTNSTPLRAACFDGHLEIVRYLVEHQADLEVANRHGHT 151

  Fly   214 CLINSVQS--VQLCLYLVRKGADINARDIQDKTALHYAIQEHRLDTTKLLIEQGADPYARSRYGD 276
            ||:.|...  .::..:|:.||||:|.:.::..||||...:...|:..|:|::..| ...|..||.
Zfish   152 CLMISCYKGHREIAQFLLEKGADVNRKSVKGNTALHDCAESGSLEIMKMLLKCDA-RMERDGYGM 215

  Fly   277 DALRTACLKGAHHIFDFLKKQLHYTPARLAEAHELMGSTFLDEHNESRVCILHWRMAHHIRAA-- 339
            ..|..|.:.|..:|.:||..|...:..:...|.||:|:||:|:..:....:.:||.|..:|.|  
Zfish   216 TPLLAASVTGHTNIVEFLVHQPRASREQRIHALELLGATFVDKKRDLLGAMRYWRRAMELRWAGG 280

  Fly   340 YSPYIEKKPQVPLRTAYENAVEFSTLEELDNIATDMDAMRTQSLLICERVLGLTHKDMLFRLTFR 404
            .:..:||....||..||:.:.|.||.|||:.:.||.|.||.|:||:.||:||..|.|..:.:.:|
Zfish   281 QAGALEKPTAGPLVPAYDCSREVSTAEELEALITDPDDMRMQALLVRERILGPAHPDTSYYIRYR 345

  Fly   405 GASYADSLQLQRCIDLWRFLLEVRVSNW---------SILHFETCFAAQALVRLMLDLHVQNSSH 460
            ||.||||...:|||.||::.|:::.||.         |.|.|...|:                  
Zfish   346 GAVYADSGNFERCIRLWKYALDMQQSNLEPLSPMTASSFLSFAELFS------------------ 392

  Fly   461 IRSDARARFVHQDK------VLPRFEDVLGVFRTLSESAIVVKHLLLLRPVFRRQQ----ENYDR 515
                    ||.||:      ....|:|::||   ||:|...|:     |.|.:|::    ..:.:
Zfish   393 --------FVLQDRAKGTLAARVSFQDLMGV---LSKSVREVE-----RAVAQRERPPEPPQFSK 441

  Fly   516 VMRCLAHLIYLLINTVHTEAQNKLICQAVHEAVVVGNLRSASTADTMLHLCASRLNVIKSGYITD 580
            .:..:.||::||........|..|..|.|:..:.: |.| |....|.||:...|.......|...
Zfish   442 ALSIILHLLFLLQKLRCGPEQEHLKRQTVYRLLKL-NPR-ARGGHTPLHMAVDRDTTSVGRYPVG 504

  Fly   581 DNFADKTVFPNADVIKLLIQCGVDVNTKNEAKSTPLHVACQPYNYDNEIVHLLLKCGGDIDQPNR 645
            .       ||:..|..||::||.||::::...:||||:|..  |...:|:..|::.|...|..|.
Zfish   505 R-------FPSLAVASLLLECGADVDSRDYDNNTPLHIAAA--NGCPDIMAALIRAGAHFDATNA 560

  Fly   646 ADKRPYDLIASNPTSTIPL--LNFVTLQCLAATAISKHRIPYHNQLHRQLEKFVRNH 700
            |.:..|.|:.:..:....|  ||..|||||||.|::.||:||...:..|:|.|:..|
Zfish   561 AQQTAYQLLEAQSSGRHALHPLNHTTLQCLAARAVTAHRLPYKGLISEQMEAFIELH 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
m-cupNP_650607.1 ANK repeat 101..175 CDD:293786 23/73 (32%)
Ank_2 <101..174 CDD:289560 23/72 (32%)
ANK 147..262 CDD:238125 45/116 (39%)
Ank_2 149..239 CDD:289560 38/91 (42%)
ANK repeat 177..208 CDD:293786 14/30 (47%)
ANK repeat 210..239 CDD:293786 11/30 (37%)
ANK repeat 241..271 CDD:293786 8/29 (28%)
Ank_4 244..294 CDD:290365 15/49 (31%)
ANK 591..>657 CDD:238125 21/65 (32%)
Ank_2 591..>641 CDD:289560 16/49 (33%)
ANK repeat 611..641 CDD:293786 9/29 (31%)
fem1aNP_956131.1 ANK 1 2..32 2/8 (25%)
Ank_2 10..112 CDD:289560 27/89 (30%)
ANK repeat 40..75 CDD:293786 11/34 (32%)
ANK 2 40..70 10/29 (34%)
ANK 73..202 CDD:238125 45/129 (35%)
ANK repeat 82..113 CDD:293786 12/30 (40%)
ANK 3 82..111 11/28 (39%)
Ank_2 87..178 CDD:289560 38/90 (42%)
ANK 4 115..144 14/28 (50%)
ANK repeat 118..146 CDD:293786 13/27 (48%)
ANK repeat 148..179 CDD:293786 11/30 (37%)
ANK 5 148..177 10/28 (36%)
ANK repeat 181..210 CDD:293786 8/29 (28%)
ANK 6 181..210 8/29 (28%)
Ank_4 182..234 CDD:290365 16/52 (31%)
ANK 7 213..242 9/28 (32%)
TPR 1 245..279 11/33 (33%)
TPR 2 339..372 13/32 (41%)
ANK 477..>565 CDD:238125 29/97 (30%)
ANK repeat 482..526 CDD:293786 14/50 (28%)
ANK 8 482..524 14/48 (29%)
Ank_5 515..568 CDD:290568 18/54 (33%)
ANK repeat 528..559 CDD:293786 10/32 (31%)
ANK 9 528..557 9/30 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 44 1.000 Domainoid score I12353
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D133963at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24173
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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