DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment m-cup and Fem1al

DIOPT Version :9

Sequence 1:NP_650607.1 Gene:m-cup / 42076 FlyBaseID:FBgn0038488 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_789799.1 Gene:Fem1al / 216622 MGIID:2441689 Length:654 Species:Mus musculus


Alignment Length:683 Identity:209/683 - (30%)
Similarity:332/683 - (48%) Gaps:107/683 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LLSRHLRHELEKLPRDSRRELVRKQRNGCAPLFIACKRGAVDIAEYLITICEANIEQRG--HFEV 137
            ||:...|.|||        ||:.:...|..||.||.:||.:|:.|||:..|.|::|..|  ||  
Mouse    22 LLASRGREELE--------ELLGEVAGGGTPLLIAARRGHLDVVEYLVDHCGASVEASGSVHF-- 76

  Fly   138 PEDNSFHYVSPLWAAVVSGKLSMVKYLVRIGCDINATSDSGSTPVRSACYMTHVDIVKFLV-ENG 201
             :..:.....|||||..:|.|::|:.|:..|..:|.|:.:.|||:|:||:..|:|:|:.|| |:.
Mouse    77 -DGETIEGAPPLWAASAAGHLAVVRSLLHRGASVNRTTCTNSTPLRAACFNGHLDVVRCLVGEHK 140

  Fly   202 ADIKRPNINGGTCLINSVQS--VQLCLYLVRKGADINARDIQDKTALHYAIQEHRLDTTKLLIEQ 264
            ||::..|.:|.|||:.|...  .::..||:.:||.:|.|..:..||||...:...|:..:||:..
Mouse   141 ADLEVANRHGHTCLMISCYKGHREIARYLLERGAQVNRRSAKGNTALHDCAESGSLEILQLLLSC 205

  Fly   265 GADPYARSRYGDDALRTACLKGAHHIFDFL------KKQLHYT------PARLA----------- 306
            .| ...|..||...|..|.:.|..:|.::|      .:||..|      .:::|           
Mouse   206 HA-RMERDGYGMTPLLAASITGHTNIVEYLIQEQPSHEQLSGTELPGEGSSQMAGNHCSTPEDAE 269

  Fly   307 --------------EAHELMGSTFLDEHNESRVCILHWRMAHHIRAAYSPYIEKKPQVPLRTAYE 357
                          ||.||:|:|::|:..:....:.|||.|..:|.....::.|.....|..||:
Mouse   270 QYESCCPTSREAAVEALELLGATYVDKKRDLLGALKHWRRAMELRHQGGGFLPKPEPQQLVLAYD 334

  Fly   358 NAVEFSTLEELDNIATDMDAMRTQSLLICERVLGLTHKDMLFRLTFRGASYADSLQLQRCIDLWR 422
            .:.|.:|.:||:.:.||.|.||.|:|||.||:||.:|.|..:.:.:|||.||||...:|||.||:
Mouse   335 YSREVTTPQELEALITDPDEMRMQALLIRERILGPSHPDTSYYIRYRGAVYADSGNFERCIRLWK 399

  Fly   423 FLLEVRVSNWSILHFETCFAAQALVRLMLDLHVQNSSHIRSDARAR---FVHQDKVLPRFEDVLG 484
            :.|:::.:|...|...|..:..:...|.        |::..|..|:   .:..|     |.|::|
Mouse   400 YALDMQQNNLEPLSPMTASSFLSFAELF--------SYVLQDHSAKGNLGMQLD-----FADLIG 451

  Fly   485 VFRTLSESAIVVKHLLLLRPVFRRQQENYDRVMRCLAHLIYLLINTVHTEAQNKLICQAVHEAVV 549
            |   ||:....|:..|.| |........:.:.:..:.||:|||.....|..|..|..|.|:.   
Mouse   452 V---LSKGVREVERALQL-PKEPDDSAQFTKAIAIILHLLYLLEKVECTPRQEHLKHQTVYR--- 509

  Fly   550 VGNLRSASTADTMLHLCASRLNVIKSGYITDDNFADKT----------VFPNADVIKLLIQCGVD 604
                         |..||.|   .|:|:.......||.          |||:..|:|:|:.||.|
Mouse   510 -------------LLKCAPR---GKNGFTPLHMAVDKETTNVGQYHVGVFPSLQVVKVLLDCGAD 558

  Fly   605 VNTKNEAKSTPLHVACQPYNYDNEIVHLLLKCGGDIDQPNRADKRPYDLIASN--PTSTIPLLNF 667
            .::::...::|||:|.|  |....|:..|::.|..:|..|...|..|:|:.|.  ..||:...|:
Mouse   559 PDSRDFDNNSPLHIAAQ--NNCPAIMDALIEAGAHMDATNTFKKTAYELLDSKLLAKSTVQPFNY 621

  Fly   668 VTLQCLAATAISKHRIPYHNQLHRQLEKFVRNH 700
            ||||||||.|:.::::||...:..:||.|::.|
Mouse   622 VTLQCLAARALDRNKVPYKGFIPEELEAFIQLH 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
m-cupNP_650607.1 ANK repeat 101..175 CDD:293786 28/75 (37%)
Ank_2 <101..174 CDD:289560 28/74 (38%)
ANK 147..262 CDD:238125 44/117 (38%)
Ank_2 149..239 CDD:289560 36/92 (39%)
ANK repeat 177..208 CDD:293786 14/31 (45%)
ANK repeat 210..239 CDD:293786 10/30 (33%)
ANK repeat 241..271 CDD:293786 8/29 (28%)
Ank_4 244..294 CDD:290365 15/49 (31%)
ANK 591..>657 CDD:238125 20/65 (31%)
Ank_2 591..>641 CDD:289560 15/49 (31%)
ANK repeat 611..641 CDD:293786 9/29 (31%)
Fem1alNP_789799.1 ANK 2..170 CDD:238125 58/158 (37%)
ANK repeat 2..33 CDD:293786 6/18 (33%)
ANK 1 2..31 3/8 (38%)
Ank_2 3..112 CDD:289560 36/100 (36%)
ANK repeat 40..72 CDD:293786 14/31 (45%)
ANK 2 40..70 13/29 (45%)
ANK repeat 82..113 CDD:293786 11/30 (37%)
ANK 3 82..111 10/28 (36%)
Ank_2 87..179 CDD:289560 36/91 (40%)
ANK 110..235 CDD:238125 43/125 (34%)
ANK 4 115..145 14/29 (48%)
ANK repeat 118..147 CDD:293786 13/28 (46%)
ANK repeat 149..180 CDD:293786 10/30 (33%)
ANK 5 149..178 9/28 (32%)
ANK repeat 182..211 CDD:293786 8/29 (28%)
ANK 6 182..211 8/29 (28%)
Ank_4 183..235 CDD:290365 15/52 (29%)
ANK 7 214..243 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 241..265 4/23 (17%)
TPR 1 283..317 12/33 (36%)
TPR 2 375..408 13/32 (41%)
ANK 500..602 CDD:238125 32/122 (26%)
Ank_5 516..573 CDD:290568 17/59 (29%)
ANK repeat 519..563 CDD:293786 12/43 (28%)
ANK 8 519..561 12/41 (29%)
Ank_5 552..605 CDD:290568 17/54 (31%)
ANK repeat 565..596 CDD:293786 10/32 (31%)
ANK 9 565..594 9/30 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I12131
eggNOG 1 0.900 - - E2759_KOG0508
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D133963at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24173
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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