DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5265 and Crot

DIOPT Version :9

Sequence 1:NP_650605.1 Gene:CG5265 / 42074 FlyBaseID:FBgn0038486 Length:643 Species:Drosophila melanogaster
Sequence 2:XP_038964380.1 Gene:Crot / 83842 RGDID:70908 Length:752 Species:Rattus norvegicus


Alignment Length:673 Identity:214/673 - (31%)
Similarity:329/673 - (48%) Gaps:79/673 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KFRDN-GKVLWNFARISALQQTRYTFGKK--MPIASYSTAKDKPKSDQPNLLKYH-------VLP 56
            ||:|. ||.|..    ..|::.:   ||:  .....|:......||.:....:|.       |..
  Rat   110 KFQDGVGKTLHQ----KLLERAK---GKRNWFSYCDYTMENQLAKSIEERTFQYQDSLPPLPVPS 167

  Fly    57 LEEILNRFMITVQPLLTPEEFKKQEKITNEFQRKEGAKLQKLLEETGEQEKNWLAHRWLKVAYLQ 121
            |||.|.:::.:|:|....:|:||.|:|..:||...|..|.:.|.|..:.::|||...||.||||.
  Rat   168 LEESLKKYLESVKPFANEDEYKKTEEIVQKFQDGVGKTLHQKLLERAKGKRNWLEEWWLNVAYLD 232

  Fly   122 FRSPVTCFSSPGMTF--PKQKFESVHEF-------VDYTSRVIFGLGEFNDLVHAKKIPIVKMGK 177
            .|.|    |...:.|  |...||  |.:       ::..|.:::....:..|:..:|:|:.|.|.
  Rat   233 VRIP----SQLNVNFVGPSPHFE--HYWPAREGTQLERGSILLWHNLNYWQLLRREKLPVHKSGN 291

  Fly   178 NELDNSQFGKVFGTCRIPRRFTDDIVYN--------PCSDYVVVIYRNHFYQLKIYD--KEGKLI 232
            ..||.:||..:|.||::| ..|.|.:.|        .|..::.|:.|...:   ::|  .:|.||
  Rat   292 TPLDMNQFRMLFSTCKVP-GITRDSIMNYFKTESEGHCPTHIAVLCRGRAF---VFDVLHDGCLI 352

  Fly   233 IAPCLAVQLEEIMAK-EKEP-GVPYGILTTDSRDNWAEAYEHLSN-TPRNRVALKTIQNAMFTVS 294
            ..|.|..||..|..| ..|| |.....||::.|..||:|.|:|.. .|.|...|:.||:::|..|
  Rat   353 TPPELLRQLTYIYQKCWNEPVGPSIAALTSEERTRWAKAREYLIGLDPENLTLLEKIQSSLFVYS 417

  Fly   295 LDECTSPKEGRDAEELILTLIHGKGSKCNSANRWMDKTIQLVVNPNGHVGFTYEHSPAEGQPIAM 359
            ::: |||....:....:..::.|.    :.|.||.||:..|:...||..|.:.:|:|.:...:..
  Rat   418 IED-TSPHATPENFSQVFEMLLGG----DPAVRWGDKSYNLISFANGIFGCSCDHAPYDAMVMVN 477

  Fly   360 MMDYVVKKMKDDPSYGECGSENF--IP-AKKIKFC-------DVSKCVEQWLIIAQKNVDKLVQD 414
            :..||.:|:.:.....: |||..  || .:::.|.       ||.:...|.|        |...|
  Rat   478 IAHYVDEKLLETEGRWK-GSEKVRDIPLPEELAFTVDEKILNDVYQAKAQHL--------KAASD 533

  Fly   415 LQMKVLKFDCYGKDFIKKQRLGPDSFVQMALQLAFFKLHYEPAAQYESAHLRIFDGGRTETIRSC 479
            ||:....|..:||...||:.|.||:|:|:|||||:::||..|...||:|..|.|..|||||:|||
  Rat   534 LQIAASTFTSFGKKLTKKEALHPDTFIQLALQLAYYRLHGRPGCCYETAMTRYFYHGRTETVRSC 598

  Fly   480 SNESLAFCHAMDDVSASAQERASKIREAVMCHQMYAKLALLGKGVDRHLFGLKLMAVENCLPVPE 544
            :.|::.:|.:|.|.|||..||..|:.:|...|....:....|||.||||.||.|:|.|..|||||
  Rat   599 TVEAVRWCQSMQDPSASLLERQQKMLDAFAKHNKMMRDCSHGKGFDRHLLGLLLIAKEEGLPVPE 663

  Fly   545 FFSSPGYVKS---THFRMSTSQVATKYDAFMG-YGPSVEDGYACCYNPREHDIILAISAWRHCQA 605
            .|..|.:.:|   .:|.:|||.|.  |....| ..|.|.:||...|:.|:...::..|:||.|..
  Rat   664 LFEDPLFSRSGGGGNFVLSTSLVG--YLRIQGVVVPMVHNGYGFFYHIRDDRFVVTCSSWRSCLE 726

  Fly   606 TDHQKIAKALAQSFAEMKDVLET 628
            ||.:|:.:.:..:|.:|..::.|
  Rat   727 TDAEKLVEMIFHAFHDMIHLMNT 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5265NP_650605.1 Carn_acyltransf 49..623 CDD:279140 200/616 (32%)
CrotXP_038964380.1 Carn_acyltransf 160..743 CDD:395612 199/608 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.